POPTR_0002s03240 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0002s03240 T222476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s03240.1 Homeodomain 395 452

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0006s0130 Salix purpurea SapurV1A.0006s0130 N 0.858
OLONG_016371 Oryza longistaminata OLONG_016371 I 0.819
LjSGA_061861.1 Lotus japonicus LjSGA_061861.1 I 0.810
GRMZM2G161435 Zea mays GRMZM2G161435 I 0.801
OBART11G03800 Oryza barthii OBART11G03800 I 0.795
PK17736.1 Cannabis sativa PK17736.1 N 0.795
MTR_2g095050 Medicago truncatula MTR_2g095050 N 0.790
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N 0.779
gene02674-v1.0-hybrid Fragaria vesca gene02674-v1.0-hybrid N 0.778
Cla023019 Citrullus lanatus Cla023019 N 0.778
evm.TU.supercontig_78.15 Carica papaya evm.TU.supercontig_78.15 N 0.778
Cucsa.395170 Cucumis sativus Cucsa.395170 N 0.778
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N 0.774
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I 0.734
Ciclev10033544m.g Citrus clementina Ciclev10033544m.g N 0.723
orange1.1g040555m.g Citrus sinensis orange1.1g040555m.g N 0.723
Sb04g008030 Sorghum bicolor Sb04g008030 I 0.717
GSMUA_Achr4G02680_001 Musa acuminata GSMUA_Achr4G02680_001 N 0.693
SELMODRAFT_68227 Selaginella moellendorffii SELMODRAFT_68227 N 0.648
SELMODRAFT_48157 Selaginella moellendorffii SELMODRAFT_48157 N 0.648
Thhalv10002247m.g Eutrema salsugineum Thhalv10002247m.g N 0.645
GLYMA04G03150 Glycine max GLYMA04G03150 I 0.629
GLYMA06G03200 Glycine max GLYMA06G03200 I 0.616
Cla015624 Citrullus lanatus Cla015624 I 0.616
MTR_1g023050 Medicago truncatula MTR_1g023050 I 0.616
cassava42524.valid.m1 Manihot esculenta cassava42524.valid.m1 I 0.616
Cucsa.105330 Cucumis sativus Cucsa.105330 I 0.616
Ca_10775 Cicer arietinum Ca_10775 I 0.616
30170.m014098 Ricinus communis 30170.m014098 I 0.616
Gorai.010G007800 Gossypium raimondii Gorai.010G007800 I 0.616
MTR_3g112300 Medicago truncatula MTR_3g112300 I 0.616
MDP0000204889 Malus domestica MDP0000204889 I 0.616
GSMUA_Achr6G07130_001 Musa acuminata GSMUA_Achr6G07130_001 I 0.616
GLYMA14G07710 Glycine max GLYMA14G07710 I 0.616
Gorai.008G031100 Gossypium raimondii Gorai.008G031100 I 0.616
TCM_034116 Theobroma cacao TCM_034116 I 0.616
Ca_04918 Cicer arietinum Ca_04918 I 0.616
PRUPE_ppa023311mg Prunus persica PRUPE_ppa023311mg I 0.615
MDP0000210119 Malus domestica MDP0000210119 I 0.615
PGSC0003DMG400022011 Solanum tuberosum PGSC0003DMG400022011 I 0.615
VIT_18s0001g13150 Vitis vinifera VIT_18s0001g13150 I 0.612
gene15202-v1.0-hybrid Fragaria vesca gene15202-v1.0-hybrid I 0.611
Pm006290 Prunus mume Pm006290 I 0.611
OLONG_022809 Oryza longistaminata OLONG_022809 I 0.604
PGSC0003DMG400003751 Solanum tuberosum PGSC0003DMG400003751 I 0.604
Solyc04g080790.2 Solanum lycopersicum Solyc04g080790.2 I 0.600
OBART10G16880 Oryza barthii OBART10G16880 I 0.600
LPERR10G12880 Leersia perrieri LPERR10G12880 I 0.600
OMERI10G13380 Oryza meridionalis OMERI10G13380 I 0.600
ORGLA10G0118100 Oryza glaberrima ORGLA10G0118100 I 0.600
OS10G0534900 Oryza sativa OS10G0534900 I 0.600
ORUFI10G17910 Oryza rufipogon ORUFI10G17910 I 0.600
BGIOSGA031494 Oryza indica BGIOSGA031494 I 0.600