POPTR_0002s12560 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0002s12560 T222480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.751 0.714
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.751 0.714
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s12560.1 Homeodomain 77 137

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

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442 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action