TF Information

PPA19070 *(Pristionchus pacificus)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	PPA19070	T222637_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxd12_CONSTRUCT M00538_2.00	PBM CONSTRUCTS	NWTWAYNDBN	NVHNRTWAWN	PBM Berger et al.(2008) Hoxd12_3481	0.622	0.545
HOXD12 M03206_2.00	Homo sapiens	SYAATAAAA	TTTTATTRS	SELEX Jolma et al.(2013) HOXD12_1	0.622	0.545
HOXD12 M03207_2.00	Homo sapiens	RVTCGTAAAAH	DTTTTACGABY	SELEX Jolma et al.(2013) HOXD12_2	0.622	0.545
HOXD12 M03208_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Jolma et al.(2013) HOXD12_3	0.622	0.545
HOXD12 M03209_2.00	Homo sapiens	DTTWATYRC	GYRATWAAH	SELEX Jolma et al.(2013) HOXD12_4	0.622	0.545
HOXD12 M05279_2.00	Homo sapiens	NKTWACGAYN	NRTCGTWAMN	SELEX Yin et al.(2017) HOXD12_eDBD_HT-SELEX	0.622	0.545
HOXD12 M05280_2.00	Homo sapiens	NRTCGTAAAH	DTTTACGAYN	SELEX Yin et al.(2017) HOXD12_eDBD_Methyl-HT-SELEX	0.622	0.545
For this family, TFs with SR scores > 0.599* will likely have a similar motif*