PRUPE_ppa009464mg (Prunus persica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PRUPE_ppa009464mg T222694_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25034.1
M01254_2.00
Cannabis sativa
NNTGACRKBN

NVMYGTCANN
PBM
Lambert et al.(2019)
pTH11259
0.647 0.660
GRMZM2G087741
M02138_2.00
Zea mays
NNTGACRKCN

NGMYGTCANN
PBM
Weirauch et al.(2014)
pTH5816
0.636 0.679
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN

NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.629 0.811
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN

NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.629 0.811
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST

ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.627 0.887
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN

NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.621 0.925
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ10624 Homeodomain 220 275

Links

Other Homeodomain family TFs
Other Prunus persica TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_29.29 Carica papaya evm.TU.supercontig_29.29 I 0.867
gene32356-v1.0-hybrid Fragaria vesca gene32356-v1.0-hybrid I 0.867
Cucsa.302660 Cucumis sativus Cucsa.302660 I 0.867
Lus10024485.g Linum usitatissimum Lus10024485.g I 0.867
Pm023742 Prunus mume Pm023742 I 0.867
GSMUA_Achr1G03660_001 Musa acuminata GSMUA_Achr1G03660_001 I 0.824
Solyc08g080120.2 Solanum lycopersicum Solyc08g080120.2 I 0.782
Cla011684 Citrullus lanatus Cla011684 I 0.782
MDP0000313776 Malus domestica MDP0000313776 I 0.782
30190.m011101 Ricinus communis 30190.m011101 I 0.782
chr2.CM0304.440.nc Lotus japonicus chr2.CM0304.440.nc I 0.782
cassava30127.valid.m1 Manihot esculenta cassava30127.valid.m1 I 0.782
PK02271.1 Cannabis sativa PK02271.1 I 0.782
TCM_016150 Theobroma cacao TCM_016150 I 0.782
Gorai.004G206600 Gossypium raimondii Gorai.004G206600 I 0.782
PGSC0003DMG400022736 Solanum tuberosum PGSC0003DMG400022736 I 0.782
Gorai.003G163800 Gossypium raimondii Gorai.003G163800 I 0.782
KNAT7 Vitis vinifera VIT_02s0025g04630 I 0.780
OB03G11790 Oryza brachyantha OB03G11790 I 0.772
ORUFI03G01570 Oryza rufipogon ORUFI03G01570 I 0.772
OBART03G01840 Oryza barthii OBART03G01840 I 0.772
OLONG_020200 Oryza longistaminata OLONG_020200 I 0.772
Bo01061s030 Brassica oleracea Bo01061s030 I 0.772
ONIVA03G01480 Oryza nivara ONIVA03G01480 I 0.772
chr1.LjT33H07.80.nd Lotus japonicus chr1.LjT33H07.80.nd I 0.771
Pavir.J39623 Panicum virgatum Pavir.J39623 I 0.771
mgf002324m Mimulus guttatus mgf002324m I 0.770
PK25034.1 Cannabis sativa PK25034.1 D 0.647
Traes_4AL_2334B226E Triticum aestivum Traes_4AL_2334B226E I 0.643
Ciclev10021319m.g Citrus clementina Ciclev10021319m.g I 0.642
Eucgr.D01935 Eucalyptus grandis Eucgr.D01935 I 0.642
GLYMA01G42410 Glycine max GLYMA01G42410 I 0.642
GLYMA11G02960 Glycine max GLYMA11G02960 I 0.642
MTR_5g011070 Medicago truncatula MTR_5g011070 I 0.642
SapurV1A.0282s0220 Salix purpurea SapurV1A.0282s0220 I 0.642
POPTR_0006s27560 Populus trichocarpa POPTR_0006s27560 I 0.642
Cagra.0628s0006 Capsella grandiflora Cagra.0628s0006 I 0.642
orange1.1g022056m.g Citrus sinensis orange1.1g022056m.g I 0.642
Gorai.008G242800 Gossypium raimondii Gorai.008G242800 I 0.642
SELMODRAFT_448401 Selaginella moellendorffii SELMODRAFT_448401 I 0.641
SELMODRAFT_159366 Selaginella moellendorffii SELMODRAFT_159366 I 0.641
GRMZM2G087741 Zea mays GRMZM2G087741 D 0.636
EuGene.1100010071 Micromonas sp RCC299 EuGene.1100010071 I 0.631
Bra027006 Brassica rapa Bra027006 I 0.630
Lus10017824.g Linum usitatissimum Lus10017824.g I 0.630
PGSC0003DMG400030737 Solanum tuberosum PGSC0003DMG400030737 I 0.629
PGSC0003DMG400015622 Solanum tuberosum PGSC0003DMG400015622 I 0.629
Si014568m.g Setaria italica Si014568m.g I 0.629
evm.TU.supercontig_187.27 Carica papaya evm.TU.supercontig_187.27 I 0.629
POPTR_0001s08550 Populus trichocarpa POPTR_0001s08550 I 0.629
Eucgr.C02727 Eucalyptus grandis Eucgr.C02727 I 0.629
PRUPE_ppa007698mg Prunus persica PRUPE_ppa007698mg I 0.629
PRUPE_ppa005712mg Prunus persica PRUPE_ppa005712mg I 0.629
Solyc07g007120.2 Solanum lycopersicum Solyc07g007120.2 I 0.629
POPTR_0018s02210 Populus trichocarpa POPTR_0018s02210 I 0.629
Solyc08g041820.2 Solanum lycopersicum Solyc08g041820.2 I 0.629
VIT_04s0008g06130 Vitis vinifera VIT_04s0008g06130 I 0.629
Carubv10001144m.g Capsella rubella Carubv10001144m.g I 0.629
Carubv10001020m.g Capsella rubella Carubv10001020m.g I 0.629
orange1.1g013045m.g Citrus sinensis orange1.1g013045m.g I 0.629
MDP0000323095 Malus domestica MDP0000323095 I 0.629
Ciclev10008269m.g Citrus clementina Ciclev10008269m.g I 0.629
Cucsa.162660 Cucumis sativus Cucsa.162660 I 0.629
Cucsa.271780 Cucumis sativus Cucsa.271780 I 0.629
mgf017901m Mimulus guttatus mgf017901m I 0.629
mgf023665m Mimulus guttatus mgf023665m I 0.629
Bostr.29827s0294 Boechera stricta Bostr.29827s0294 I 0.629
Cagra.1398s0046 Capsella grandiflora Cagra.1398s0046 I 0.629
Bostr.23997s0006 Boechera stricta Bostr.23997s0006 I 0.629
Aquca_013_00468 Aquilegia coerulea Aquca_013_00468 I 0.629
mgf025072m Mimulus guttatus mgf025072m I 0.629
mgf025908m Mimulus guttatus mgf025908m I 0.629
cassava8123.valid.m1 Manihot esculenta cassava8123.valid.m1 I 0.629
cassava20740.m1 Manihot esculenta cassava20740.m1 I 0.629
SapurV1A.1301s0010 Salix purpurea SapurV1A.1301s0010 I 0.629
SapurV1A.0984s0020 Salix purpurea SapurV1A.0984s0020 I 0.629
OS08G0292900 Oryza sativa OS08G0292900 I 0.629
Thhalv10004250m.g Eutrema salsugineum Thhalv10004250m.g I 0.629
AMTR_s00001p00264520 Amborella trichopoda AMTR_s00001p00264520 I 0.629
Thhalv10013773m.g Eutrema salsugineum Thhalv10013773m.g I 0.629
Ca_01733 Cicer arietinum Ca_01733 I 0.629
Ca_02401 Cicer arietinum Ca_02401 I 0.629
Pm027656 Prunus mume Pm027656 I 0.629
29848.m004577 Ricinus communis 29848.m004577 I 0.629
Pm004674 Prunus mume Pm004674 I 0.629
Cla022688 Citrullus lanatus Cla022688 I 0.629
Ca_09068 Cicer arietinum Ca_09068 I 0.629
Cla021315 Citrullus lanatus Cla021315 I 0.629
Eucgr.C01686 Eucalyptus grandis Eucgr.C01686 I 0.629
ORUFI08G10720 Oryza rufipogon ORUFI08G10720 I 0.629
MDP0000137501 Malus domestica MDP0000137501 I 0.629
KNAT3 Arabidopsis thaliana AT5G25220 D 0.629
BGIOSGA028399 Oryza indica BGIOSGA028399 I 0.629
MDP0000135063 Malus domestica MDP0000135063 I 0.629
GLYMA05G03650 Glycine max GLYMA05G03650 I 0.629
GLYMA06G06886 Glycine max GLYMA06G06886 I 0.629
GLYMA14G13750 Glycine max GLYMA14G13750 I 0.629
GLYMA17G14180 Glycine max GLYMA17G14180 I 0.629
Gorai.010G117100 Gossypium raimondii Gorai.010G117100 I 0.629
Gorai.009G060200 Gossypium raimondii Gorai.009G060200 I 0.629
Gorai.013G213900 Gossypium raimondii Gorai.013G213900 I 0.629
GSMUA_Achr10G06000_001 Musa acuminata GSMUA_Achr10G06000_001 I 0.629
GLYMA17G32980 Glycine max GLYMA17G32980 I 0.629
Bo2g010190 Brassica oleracea Bo2g010190 I 0.629
GLYMA04G06810 Glycine max GLYMA04G06810 I 0.629
Lus10003183.g Linum usitatissimum Lus10003183.g I 0.629
Bo3g006870 Brassica oleracea Bo3g006870 I 0.629
Bra028554 Brassica rapa Bra028554 I 0.629
Lus10006291.g Linum usitatissimum Lus10006291.g I 0.629
Bra006085 Brassica rapa Bra006085 I 0.629
BRADI3G19927 Brachypodium distachyon BRADI3G19927 I 0.629
Lus10001941.g Linum usitatissimum Lus10001941.g I 0.629
LjSGA_075335.1 Lotus japonicus LjSGA_075335.1 I 0.629
Bo2g158910 Brassica oleracea Bo2g158910 I 0.629
KNAT3 Arabidopsis lyrata fgenesh2_kg.6__2508__AT5G25220.1 I 0.629
KNAT4 Arabidopsis lyrata fgenesh2_kg.6__1072__AT5G11060.1 I 0.629
PDK_20s1397241g001 Phoenix dactylifera PDK_20s1397241g001 I 0.629
KNAT4 Arabidopsis thaliana AT5G11060 D 0.629
Lus10001934.g Linum usitatissimum Lus10001934.g I 0.629
OBART08G09500 Oryza barthii OBART08G09500 I 0.629
gene10994-v1.0-hybrid Fragaria vesca gene10994-v1.0-hybrid I 0.629
OB08G18480 Oryza brachyantha OB08G18480 I 0.629
Gorai.001G035700 Gossypium raimondii Gorai.001G035700 I 0.629
OPUNC08G08730 Oryza punctata OPUNC08G08730 I 0.629
LPERR08G08210 Leersia perrieri LPERR08G08210 I 0.629
gene30834-v1.0-hybrid Fragaria vesca gene30834-v1.0-hybrid I 0.629
OGLUM08G10220 Oryza glumaepatula OGLUM08G10220 I 0.629
ONIVA10G10210 Oryza nivara ONIVA10G10210 I 0.629
PK15857.1 Cannabis sativa PK15857.1 I 0.629
MTR_1g012960 Medicago truncatula MTR_1g012960 I 0.629
ORGLA08G0081300 Oryza glaberrima ORGLA08G0081300 I 0.629
MTR_3g106400 Medicago truncatula MTR_3g106400 I 0.629
MDP0000167286 Malus domestica MDP0000167286 I 0.629
Bra023965 Brassica rapa Bra023965 I 0.628
KNAT5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000752 I 0.628
Cagra.12385s0010 Capsella grandiflora Cagra.12385s0010 I 0.628
Bo7g115600 Brassica oleracea Bo7g115600 I 0.628
Carubv10005036m.g Capsella rubella Carubv10005036m.g I 0.628
Bostr.7867s1058 Boechera stricta Bostr.7867s1058 I 0.628
KNAT5 Arabidopsis thaliana AT4G32040 I 0.628
Thhalv10025443m.g Eutrema salsugineum Thhalv10025443m.g I 0.628
Bra036636 Brassica rapa Bra036636 I 0.627
Bo9g028790 Brassica oleracea Bo9g028790 I 0.627
Carubv10020735m.g Capsella rubella Carubv10020735m.g I 0.627
Cagra.1670s0003 Capsella grandiflora Cagra.1670s0003 I 0.627
Thhalv10023617m.g Eutrema salsugineum Thhalv10023617m.g I 0.627
Bostr.22157s0023 Boechera stricta Bostr.22157s0023 I 0.627
KNAT7 Arabidopsis thaliana AT1G62990 D 0.627
KNAT7 Arabidopsis lyrata fgenesh2_kg.2__183__AT1G62990.1 I 0.627
ORUFI03G34060 Oryza rufipogon ORUFI03G34060 I 0.626
ORGLA03G0296100 Oryza glaberrima ORGLA03G0296100 I 0.626
OPUNC03G29850 Oryza punctata OPUNC03G29850 I 0.626
OMERI03G29420 Oryza meridionalis OMERI03G29420 I 0.626
OGLUM03G32330 Oryza glumaepatula OGLUM03G32330 I 0.626
OBART03G32690 Oryza barthii OBART03G32690 I 0.626
ONIVA03G34200 Oryza nivara ONIVA03G34200 I 0.626
fgenesh1_pm.scaffold_154000010 Physcomitrella patens fgenesh1_pm.scaffold_154000010 I 0.625
AMTR_s00026p00162850 Amborella trichopoda AMTR_s00026p00162850 I 0.625
Bo7g096160 Brassica oleracea Bo7g096160 I 0.625
Aquca_016_00110 Aquilegia coerulea Aquca_016_00110 I 0.625
Ca_24500 Cicer arietinum Ca_24500 I 0.625
MTR_2g461240 Medicago truncatula MTR_2g461240 I 0.625
Gorai.009G012300 Gossypium raimondii Gorai.009G012300 I 0.625
GLYMA17G11330 Glycine max GLYMA17G11330 I 0.625
VIT_11s0118g00800 Vitis vinifera VIT_11s0118g00800 I 0.625
MTR_4g116545 Medicago truncatula MTR_4g116545 I 0.625
POPTR_0018s12200 Populus trichocarpa POPTR_0018s12200 I 0.625
evm.TU.supercontig_46.88 Carica papaya evm.TU.supercontig_46.88 I 0.625
OSTLU_5313 Ostreococcus lucimarinus OSTLU_5313 I 0.625
XM_002308343.1 Populus trichocarpa POPTR_0006s20440 I 0.625
chr6.CM0037.1380.nd Lotus japonicus chr6.CM0037.1380.nd I 0.625
GLYMA13G22530 Glycine max GLYMA13G22530 I 0.625
cassava7316.valid.m1 Manihot esculenta cassava7316.valid.m1 I 0.625
cassava7317.valid.m1 Manihot esculenta cassava7317.valid.m1 I 0.625
cassava7318.valid.m1 Manihot esculenta cassava7318.valid.m1 I 0.625
cassava7319.valid.m1 Manihot esculenta cassava7319.valid.m1 I 0.625
cassava36784.valid.m1 Manihot esculenta cassava36784.valid.m1 I 0.625
fgenesh1_pg.C_Chr_04.0001000291 Ostreococcus tauri fgenesh1_pg.C_Chr_04.0001000291 I 0.625
GLYMA09G12820 Glycine max GLYMA09G12820 I 0.625
Ca_06754 Cicer arietinum Ca_06754 I 0.625
SapurV1A.0626s0210 Salix purpurea SapurV1A.0626s0210 I 0.625
e_gw1.77.85.1 Physcomitrella patens e_gw1.77.85.1 I 0.625
SELMODRAFT_450988 Selaginella moellendorffii SELMODRAFT_450988 I 0.624
SELMODRAFT_173857 Selaginella moellendorffii SELMODRAFT_173857 I 0.624
SELMODRAFT_451281 Selaginella moellendorffii SELMODRAFT_451281 I 0.624
Bra011317 Brassica rapa Bra011317 I 0.624
SELMODRAFT_451277 Selaginella moellendorffii SELMODRAFT_451277 I 0.624
Bo1g010750 Brassica oleracea Bo1g010750 I 0.624
HOS66 Oryza sativa OS03G0123500 D 0.621
ORGLA03G0016000 Oryza glaberrima ORGLA03G0016000 I 0.621
LPERR03G01680 Leersia perrieri LPERR03G01680 I 0.621
BGIOSGA011746 Oryza indica BGIOSGA011746 I 0.621
BRADI1G76970 Brachypodium distachyon BRADI1G76970 I 0.621
OGLUM03G01790 Oryza glumaepatula OGLUM03G01790 I 0.621
OPUNC03G01680 Oryza punctata OPUNC03G01680 I 0.621
OMERI03G01780 Oryza meridionalis OMERI03G01780 I 0.621
Traes_5AL_A66D34380 Triticum aestivum Traes_5AL_A66D34380 I 0.621
Si036727m.g Setaria italica Si036727m.g I 0.620
GRMZM2G159431 Zea mays GRMZM2G159431 I 0.620
GSMUA_Achr3G13370_001 Musa acuminata GSMUA_Achr3G13370_001 I 0.617
mgf008059m Mimulus guttatus mgf008059m I 0.617
GSMUA_Achr7G05170_001 Musa acuminata GSMUA_Achr7G05170_001 I 0.617
Gorai.010G056100 Gossypium raimondii Gorai.010G056100 I 0.616
fgenesh1_pm.chr_4_#_82 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_82 I 0.615
PDK_20s1461121g001 Phoenix dactylifera PDK_20s1461121g001 I 0.613
mgf005594m Mimulus guttatus mgf005594m I 0.613
PDK_20s1907321g001 Phoenix dactylifera PDK_20s1907321g001 I 0.613
mgf009465m Mimulus guttatus mgf009465m I 0.613
mgf014368m Mimulus guttatus mgf014368m I 0.613
DAPPUDRAFT_314795 Daphnia pulex DAPPUDRAFT_314795 I 0.613
mgf015016m Mimulus guttatus mgf015016m I 0.613
GSMUA_Achr4G20400_001 Musa acuminata GSMUA_Achr4G20400_001 I 0.613
HMEL005588 Heliconius melpomene HMEL005588 I 0.613
KGM_17297 Danaus plexippus KGM_17297 I 0.613
est_orfs.8_8268_4271518:3 Micromonas pusilla est_orfs.8_8268_4271518:3 I 0.613
GSMUA_Achr1G26000_001 Musa acuminata GSMUA_Achr1G26000_001 I 0.613
Solyc12g010410.1 Solanum lycopersicum Solyc12g010410.1 I 0.612
PGSC0003DMG400007887 Solanum tuberosum PGSC0003DMG400007887 I 0.612
AALB005452 Anopheles albimanus AALB005452 I 0.608
Traes_4BL_C5C94B24F Triticum aestivum Traes_4BL_C5C94B24F I 0.608
TRIUR3_25675 Triticum urartu TRIUR3_25675 I 0.608
MLOC_66788 Hordeum vulgare MLOC_66788 I 0.608
Traes_4DL_B6034D454 Triticum aestivum Traes_4DL_B6034D454 I 0.608
F775_31219 Aegilops tauschii F775_31219 I 0.608
PDK_20s1635431g001 Phoenix dactylifera PDK_20s1635431g001 I 0.607
GRMZM2G060507 Zea mays GRMZM2G060507 I 0.607
GSMUA_Achr3G26230_001 Musa acuminata GSMUA_Achr3G26230_001 I 0.606
GLYMA14G10430 Glycine max GLYMA14G10430 I 0.606
KNAT1 Arabidopsis lyrata fgenesh2_kg.6__2861__AT4G08150.1 I 0.606
KNAT1 Arabidopsis thaliana AT4G08150 I 0.606
Bo3g043050 Brassica oleracea Bo3g043050 I 0.606
Bra000638 Brassica rapa Bra000638 I 0.606
GLYMA0041S00360 Glycine max GLYMA0041S00360 I 0.606
Thhalv10028724m.g Eutrema salsugineum Thhalv10028724m.g I 0.606
Cla021211 Citrullus lanatus Cla021211 I 0.606
Cucsa.395320 Cucumis sativus Cucsa.395320 I 0.606
Bostr.3877s0047 Boechera stricta Bostr.3877s0047 I 0.606
Cagra.7524s0001 Capsella grandiflora Cagra.7524s0001 I 0.606
KNAT1 Vitis vinifera VIT_18s0001g08380 I 0.606
VIT_17s0000g08710 Vitis vinifera VIT_17s0000g08710 I 0.606
Carubv10002748m.g Capsella rubella Carubv10002748m.g I 0.606
ORGLA03G0270100 Oryza glaberrima ORGLA03G0270100 I 0.603
TCM_038269 Theobroma cacao TCM_038269 I 0.603
Sb01g009460 Sorghum bicolor Sb01g009460 I 0.602
cassava23924.valid.m1 Manihot esculenta cassava23924.valid.m1 I 0.602
Si036193m.g Setaria italica Si036193m.g I 0.602