CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF12g01810
(
Pseudozyma brasiliensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PSEUBRA_SCAF12g01810
T222728_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UM04928
M02178_2.00
Ustilago maydis
NNNHMATHHN
NDDATKDNNN
PBM
Weirauch et al.(2014)
pTH5932
0.827
0.912
ARX
M00265_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
ARX_T333N
0.712
0.474
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST09243
Homeodomain
243
299
RKKRNKCTPDQLRSLEAFFEKNRNPTGRIRHELSRKLRMPERSVQVWFQNRRAKLKV
Links
Other
Homeodomain
family TFs
Other
Pseudozyma brasiliensis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy