CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PSEUBRA_SCAF1g00359
(
Pseudozyma brasiliensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PSEUBRA_SCAF1g00359
T222730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.628
0.404
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG
CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.628
0.404
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR
YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.628
0.404
YHP1
M10797_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.628
0.404
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.612
0.439
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.612
0.439
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.612
0.439
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.612
0.439
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST09899
Homeodomain
116
172
IRRRRRTRPDEANLLAQVYAKNPFPDHETRLFLANRVGMSVRAVSVWFQNRRQAEKK
Links
Other
Homeodomain
family TFs
Other
Pseudozyma brasiliensis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHSY_003201
Pseudozyma hubeiensis
PHSY_003201
I
0.867
UHOR_00441
Ustilago hordei
UHOR_00441
I
0.867
sr11633
Sporisorium reilianum
sr11633
I
0.867
PaG_01825
Pseudozyma aphidis
PaG_01825
I
0.857
JL09_g4323
Pichia kudriavzevii
JL09_g4323
I
0.652
K437DRAFT_81582
Tilletiaria anomala
K437DRAFT_81582
N
0.649
ZBAI_03698
Zygosaccharomyces bailii
ZBAI_03698
I
0.648
Kpol_1004p50
Vanderwaltozyma polyspora
Kpol_1004p50
I
0.648
ZYRO0D13596g
Zygosaccharomyces rouxii
ZYRO0D13596g
I
0.648
ZBAI_09382
Zygosaccharomyces bailii
ZBAI_09382
I
0.648
PIIN_05295
Piriformospora indica
PIIN_05295
I
0.644
CAGL0G07249g
Candida glabrata
CAGL0G07249g
I
0.634
CPAG_00635
Candida parapsilosis
CPAG_00635
I
0.631
CORT_0H00310
Candida orthopsilosis
CORT_0H00310
I
0.631
PGUG_00382
Meyerozyma guilliermondii
PGUG_00382
I
0.630
PGUG_00382
Candida guilliermondii
PGUG_00382
I
0.630
SOCG_04925
Schizosaccharomyces octosporus
SOCG_04925
I
0.629
YHP1
Saccharomyces cerevisiae
YDR451C
D
0.628
SU7_2763
Saccharomyces arboricola
SU7_2763
I
0.628
5231_YDR451C
Saccharomyces mikatae
5231_YDR451C
I
0.628
5532_YDR451C
Saccharomyces bayanus
5532_YDR451C
I
0.628
SKUD_123402
Saccharomyces kudriavzevii
SKUD_123402
I
0.628
5594_YDR451C
Saccharomyces paradoxus
5594_YDR451C
I
0.628
KAFR_0C05600
Kazachstania africana
KAFR_0C05600
I
0.625
PredSwiss_CON591.1
Pneumocystis carinii
PredSwiss_CON591.1
I
0.622
PNEG_03146
Pneumocystis murina
PNEG_03146
I
0.622
TDEL_0A04320
Torulaspora delbrueckii
TDEL_0A04320
I
0.621
XP_002491722.1
Pichia pastoris
XP_002491722.1
I
0.616
PAS_chr2-1_0784
Komagataella pastoris
PAS_chr2-1_0784
I
0.616
17440_YML027W
Saccharomyces paradoxus
17440_YML027W
I
0.612
TBLA_0D01390
Tetrapisispora blattae
TBLA_0D01390
I
0.612
TPHA_0K00360
Tetrapisispora phaffii
TPHA_0K00360
I
0.612
SU7_2475
Saccharomyces arboricola
SU7_2475
I
0.612
YOX1
Saccharomyces cerevisiae
YML027W
D
0.612
MVLG_02993
Microbotryum violaceum
MVLG_02993
I
0.609
SPOG_04875
Schizosaccharomyces cryophilus
SPOG_04875
I
0.607
TPHA_0D02630
Tetrapisispora phaffii
TPHA_0D02630
I
0.607
Kpol_1023p80
Vanderwaltozyma polyspora
Kpol_1023p80
I
0.606
YALI0_E20449g
Yarrowia lipolytica
YALI0_E20449g
I
0.604
KLLA0_B01584g
Kluyveromyces lactis
KLLA0_B01584g
I
0.600