Q4S8E1_TETNG (Tetraodon nigroviridis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Q4S8E1_TETNG T222838_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.805 0.912
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.805 0.912
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.805 0.912
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.805 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q4S8E1_TETNG Homeodomain 236 307

Links

Other Homeodomain family TFs
Other Tetraodon nigroviridis TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R010756 Calypte anna Aan_R010756 I 0.805
Afo_R011837 Aptenodytes forsteri Afo_R011837 I 0.805
Brh_R012838 Buceros rhinoceros Brh_R012838 I 0.805
CapteG124171 Capitella teleta CapteG124171 I 0.616
Cmyd_10005786 Chelonia mydas Cmyd_10005786 I 0.805
HMBOX1 Anolis carolinensis ENSACAG00000010160 I 0.805
ENSAMEG00000016028 Ailuropoda melanoleuca ENSAMEG00000016028 I 0.805
ENSAMXG00000011241 Astyanax mexicanus ENSAMXG00000011241 I 0.722
ENSAMXG00000018539 Astyanax mexicanus ENSAMXG00000018539 I 0.809
ENSAPLG00000006003 Anas platyrhynchos ENSAPLG00000006003 I 0.805
HMBOX1 Bos taurus ENSBTAG00000010819 I 0.805
HMBOX1 Canis familiaris ENSCAFG00000008237 I 0.805
HMBOX1 Choloepus hoffmanni ENSCHOG00000005538 I 0.805
ENSCING00000003920 Ciona intestinalis ENSCING00000003920 I 0.800
HMBOX1 Callithrix jacchus ENSCJAG00000015654 I 0.805
HMBOX1 Cavia porcellus ENSCPOG00000011124 I 0.805
ENSCSAG00000015894 Chlorocebus sabaeus ENSCSAG00000015894 I 0.805
ENSCSAVG00000002486 Ciona savignyi ENSCSAVG00000002486 I 0.800
hnf1a Danio rerio ENSDARG00000009470 I 0.626
hmbox1b Danio rerio ENSDARG00000018913 I 0.810
hmbox1a Danio rerio ENSDARG00000027082 I 0.809
zgc:91944 Danio rerio ENSDARG00000035887 I 0.722
HMBOX1 Dasypus novemcinctus ENSDNOG00000031840 I 0.805
HMBOX1 Equus caballus ENSECAG00000008240 I 0.805
ENSFALG00000010859 Ficedula albicollis ENSFALG00000010859 I 0.805
HMBOX1 Felis catus ENSFCAG00000022672 I 0.805
HMBOX1 Homo sapiens ENSG00000147421 D 0.805
hmbox1b Gasterosteus aculeatus ENSGACG00000004391 I 0.809
zgc:91944 Gasterosteus aculeatus ENSGACG00000009223 I 0.722
hnf1a Gasterosteus aculeatus ENSGACG00000012691 I 0.626
hmbox1a Gasterosteus aculeatus ENSGACG00000014814 I 0.866
HMBOX1 Gallus gallus ENSGALG00000016633 I 0.805
HMBOX1 Gorilla gorilla ENSGGOG00000000860 I 0.805
ENSGMOG00000002742 Gadus morhua ENSGMOG00000002742 I 0.792
ENSGMOG00000004622 Gadus morhua ENSGMOG00000004622 I 0.722
ENSGMOG00000006872 Gadus morhua ENSGMOG00000006872 I 0.804
ENSLACG00000011304 Latimeria chalumnae ENSLACG00000011304 I 0.767
HMBOX1 Loxodonta africana ENSLAFG00000032318 I 0.805
ENSLOCG00000001916 Lepisosteus oculatus ENSLOCG00000001916 I 0.767
ENSLOCG00000015994 Lepisosteus oculatus ENSLOCG00000015994 I 0.805
ENSMEUG00000015023 Macropus eugenii ENSMEUG00000015023 I 0.805
HMBOX1 Myotis lucifugus ENSMLUG00000007478 I 0.805
HMBOX1 Macaca mulatta ENSMMUG00000014981 I 0.805
HMBOX1 Monodelphis domestica ENSMODG00000008788 I 0.805
ENSMPUG00000001070 Mustela putorius furo ENSMPUG00000001070 I 0.805
Hmbox1 Mus musculus ENSMUSG00000021972 D 0.805
ENSNLEG00000016701 Nomascus leucogenys ENSNLEG00000016701 I 0.805
ENSOARG00000015036 Ovis aries ENSOARG00000015036 I 0.805
HMBOX1 Oryctolagus cuniculus ENSOCUG00000017211 I 0.805
HMBOX1 Otolemur garnettii ENSOGAG00000001381 I 0.805
ENSONIG00000001328 Oreochromis niloticus ENSONIG00000001328 I 0.809
ENSONIG00000003040 Oreochromis niloticus ENSONIG00000003040 I 0.866
ENSONIG00000007704 Oreochromis niloticus ENSONIG00000007704 I 0.722
ENSONIG00000011178 Oreochromis niloticus ENSONIG00000011178 I 0.626
hmbox1a Oryzias latipes ENSORLG00000014467 I 0.862
hmbox1b Oryzias latipes ENSORLG00000016242 I 0.809
ENSORLG00000018971 Oryzias latipes ENSORLG00000018971 I 0.626
zgc:91944 Oryzias latipes ENSORLG00000020883 I 0.722
ENSP00000401769 Macaca fascicularis ENSP00000401769 I 0.805
ENSP00000401769-D1 Bos grunniens ENSP00000401769-D1 I 0.805
ENSPANG00000014537 Papio anubis ENSPANG00000014537 I 0.805
HMBOX1 Procavia capensis ENSPCAG00000012005 I 0.805
ENSPFOG00000000843 Poecilia formosa ENSPFOG00000000843 I 0.809
ENSPFOG00000012263 Poecilia formosa ENSPFOG00000012263 I 0.722
ENSPFOG00000013053 Poecilia formosa ENSPFOG00000013053 I 0.626
ENSPFOG00000017886 Poecilia formosa ENSPFOG00000017886 I 0.867
ENSPPYG00000018480 Pongo abelii ENSPPYG00000018480 I 0.805
ENSPSIG00000016826 Pelodiscus sinensis ENSPSIG00000016826 I 0.805
HMBOX1 Pan troglodytes ENSPTRG00000020127 I 0.805
Hmbox1 Rattus norvegicus ENSRNOG00000013326 I 0.805
ENSSHAG00000016211 Sarcophilus harrisii ENSSHAG00000016211 I 0.805
HMBOX1 Sus scrofa ENSSSCG00000009682 I 0.805
HMBOX1 Tupaia belangeri ENSTBEG00000016300 I 0.622
HMBOX1 Taeniopygia guttata ENSTGUG00000013324 I 0.805
hnf1a Tetraodon nigroviridis ENSTNIG00000011468 I 0.626
hmbox1a Tetraodon nigroviridis ENSTNIG00000011904 I 0.867
zgc:91944 Tetraodon nigroviridis ENSTNIG00000014025 I 0.722
hmbox1b Takifugu rubripes ENSTRUG00000004378 I 0.809
hmbox1a Takifugu rubripes ENSTRUG00000006366 I 0.867
zgc:91944 Takifugu rubripes ENSTRUG00000012550 I 0.722
hnf1a Takifugu rubripes ENSTRUG00000016222 I 0.626
ENSTSYG00000001109 Tarsius syrichta ENSTSYG00000001109 I 0.805
HMBOX1 Tursiops truncatus ENSTTRG00000015467 I 0.805
ENSXMAG00000001795 Xiphophorus maculatus ENSXMAG00000001795 I 0.809
ENSXMAG00000003472 Xiphophorus maculatus ENSXMAG00000003472 I 0.626
ENSXMAG00000005730 Xiphophorus maculatus ENSXMAG00000005730 I 0.722
ENSXMAG00000011675 Xiphophorus maculatus ENSXMAG00000011675 I 0.867
fgenesh2_pg.scaffold_505000025 Branchiostoma floridae fgenesh2_pg.scaffold_505000025 I 0.770
Gfo_R008926 Geospiza fortis Gfo_R008926 I 0.805
HelroG166133 Helobdella robusta HelroG166133 I 0.615
Myotis_brandtii_HMBOX1_10012332 Myotis brandtii Myotis_brandtii_HMBOX1_10012332 I 0.805
SPU_002791 Strongylocentrotus purpuratus SPU_002791 I 0.688
SPU_022737 Strongylocentrotus purpuratus SPU_022737 I 0.688
TriadG28952 Trichoplax adhaerens TriadG28952 I 0.601
hmbox1.S Xenopus laevis XB-GENE-6078482 I 0.805