RHTO_03185 (Rhodosporidium toruloides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 RHTO_03185 T222841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN

NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.606 0.386
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG

CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.606 0.386
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR

YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.606 0.386
YHP1
M10797_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.606 0.386
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS25456 Homeodomain 70 126

Links

Other Homeodomain family TFs
Other Rhodosporidium toruloides TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.C_scaffold_6000346 Sporobolomyces roseus fgenesh1_pg.C_scaffold_6000346 N 0.807
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.803
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.688
J056_000182 Wallemia ichthyophaga J056_000182 I 0.677
E5Q_03771 Mixia osmundae E5Q_03771 I 0.665
PTTG_03012 Puccinia triticina PTTG_03012 I 0.653
SCHCODRAFT_257987 Schizophyllum commune SCHCODRAFT_257987 I 0.652
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.650
XP_002491722.1 Pichia pastoris XP_002491722.1 I 0.650
estExt_fgenesh1_pg.C_10219 Sporobolomyces roseus estExt_fgenesh1_pg.C_10219 I 0.649
AMAG_08574 Allomyces macrogynus AMAG_08574 N 0.648
MVLG_02963 Microbotryum violaceum MVLG_02963 I 0.645
EDEG_01594 Edhazardia aedis EDEG_01594 I 0.644
YALI0_E20449g Yarrowia lipolytica YALI0_E20449g I 0.643
MELLADRAFT_35504 Melampsora laricipopulina MELLADRAFT_35504 I 0.642
RHTO_06229 Rhodosporidium toruloides RHTO_06229 I 0.641
DACRYDRAFT_108097 Dacryopinax sp DACRYDRAFT_108097 I 0.641
RTG_01934 Rhodotorula glutinis RTG_01934 I 0.641
AMAG_09998 Allomyces macrogynus AMAG_09998 N 0.640
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.639
AGABI2DRAFT_192725 Agaricus bisporus AGABI2DRAFT_192725 I 0.634
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.632
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.629
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.625
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.625
GLOINDRAFT_43985 Rhizophagus irregularis GLOINDRAFT_43985 I 0.620
V565_070630 Rhizoctonia solani V565_070630 I 0.620
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.619
CNJ00280 Cryptococcus neoformans CNJ00280 I 0.618
L804_00025 Cryptococcus gattii L804_00025 I 0.618
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.617
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.617
CD36_70900 Candida dubliniensis CD36_70900 I 0.616
CaO19.7017 Candida albicans CaO19.7017 I 0.616
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.615
CTRG_04888 Candida tropicalis CTRG_04888 I 0.615
G210_2310 Candida maltosa G210_2310 I 0.615
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.615
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.615
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.614
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.614
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.614
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.614
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.613
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.612
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.612
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.612
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.612
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.611
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.611
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.611
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.611
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.610
CERSUDRAFT_94820 Ceriporiopsis subvermispora CERSUDRAFT_94820 I 0.608
A1Q1_06430 Trichosporon asahii A1Q1_06430 N 0.607
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.607
YHP1 Saccharomyces cerevisiae YDR451C D 0.606
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.606
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.606
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.606
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.606
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.606
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.603
RO3G_13360 Rhizopus oryzae RO3G_13360 I 0.603
RO3G_11930 Rhizopus oryzae RO3G_11930 I 0.603
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.603
CNL04500 Cryptococcus neoformans CNL04500 N 0.602
L804_00591 Cryptococcus gattii L804_00591 N 0.602
SPPG_01974 Spizellomyces punctatus SPPG_01974 N 0.601
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.600
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.599
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.599