scaffold_603934.1 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 scaffold_603934.1 T223035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_603934.1 Homeodomain 1 45

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo9g006410 Brassica oleracea Bo9g006410 N 0.850
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.846
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.846
Pm012761 Prunus mume Pm012761 N 0.844
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.823
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.816
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.808
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.795
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.795
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.788
TCM_008214 Theobroma cacao TCM_008214 I 0.726
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.705
OBART05G11630 Oryza barthii OBART05G11630 N 0.678
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.665
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.665
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.660
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.660
OB01G35260 Oryza brachyantha OB01G35260 N 0.660
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.660
OBART01G26120 Oryza barthii OBART01G26120 N 0.660
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.660
D915_07707 Fasciola hepatica D915_07707 N 0.629
ENSDNOG00000038094 Dasypus novemcinctus ENSDNOG00000038094 N 0.627
GLYMA08G26550 Glycine max GLYMA08G26550 N 0.623
BTMF_0000474601 Brugia timori BTMF_0000474601 N 0.608
OESDEN_18963 Oesophagostomum dentatum OESDEN_18963 N 0.600
DICVIV_12877 Dictyocaulus viviparus DICVIV_12877 N 0.600