SELMODRAFT_415291 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_415291 T223098_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KNOX3_HORVU
M10790_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$KNOX3_01
0.807 0.804
KNAT6
M02037_2.00
Arabidopsis thaliana
NNWGACNNNN

NNNNGTCWNN
PBM
Weirauch et al.(2014)
pTH7296
0.791 0.750
GRMZM2G135447
M02139_2.00
Zea mays
DTGACRKS

SMYGTCAH
PBM
Weirauch et al.(2014)
pTH6328
0.784 0.750
GRMZM2G087741
M02138_2.00
Zea mays
NNTGACRKCN

NGMYGTCANN
PBM
Weirauch et al.(2014)
pTH5816
0.750 0.696
PK25034.1
M01254_2.00
Cannabis sativa
NNTGACRKBN

NVMYGTCANN
PBM
Lambert et al.(2019)
pTH11259
0.650 0.679
TGIF2LX
M03171_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2LX_1
0.606 0.464
TGIF2LX
M05191_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_HT-SELEX
0.606 0.464
TGIF2LX
M05193_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_HT-SELEX
0.606 0.464
TGIF2LX
M05192_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_Methyl-HT-SELEX
0.606 0.464
TGIF2LX
M05194_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_Methyl-HT-SELEX
0.606 0.464
TGIF2LY
M05313_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_HT-SELEX
0.606 0.446
TGIF2LY
M05314_2.00
Homo sapiens
YGACABVTGTCR

YGACABVTGTCR
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_Methyl-HT-SELEX
0.606 0.446
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ23802 Homeodomain 259 317
EFJ23803 Homeodomain 235 293

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

Invalid Input OrderBy

318 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action