SELMODRAFT_451353 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_451353 T223125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV

BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.657 0.411
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA

TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.657 0.375
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN

NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.657 0.375
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ30617 Homeodomain 62 123

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

255 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_84885 Selaginella moellendorffii SELMODRAFT_84885 I 0.842
Gorai.007G372000 Gossypium raimondii Gorai.007G372000 I 0.699
GSMUA_Achr10G07260_001 Musa acuminata GSMUA_Achr10G07260_001 I 0.689
chr5.CM0180.70.nc Lotus japonicus chr5.CM0180.70.nc I 0.679
Lus10016026.g Linum usitatissimum Lus10016026.g I 0.679
gene20491-v1.0-hybrid Fragaria vesca gene20491-v1.0-hybrid I 0.678
Bra025839 Brassica rapa Bra025839 I 0.667
WOX14 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001881 I 0.667
Gorai.004G038300 Gossypium raimondii Gorai.004G038300 I 0.667
Carubv10010349m.g Capsella rubella Carubv10010349m.g I 0.667
Bostr.3717s0001 Boechera stricta Bostr.3717s0001 I 0.667
Bostr.7128s0661 Boechera stricta Bostr.7128s0661 I 0.667
Cagra.6160s0025 Capsella grandiflora Cagra.6160s0025 I 0.667
Cagra.6160s0026 Capsella grandiflora Cagra.6160s0026 I 0.667
Thhalv10008824m.g Eutrema salsugineum Thhalv10008824m.g I 0.667
Carubv10012447m.g Capsella rubella Carubv10012447m.g I 0.667
Bo5g030590 Brassica oleracea Bo5g030590 I 0.667
WOX14 Arabidopsis thaliana AT1G20700 I 0.667
WOX10 Arabidopsis thaliana AT1G20710 I 0.665
Ciclev10002354m.g Citrus clementina Ciclev10002354m.g I 0.665
Bo09314s010 Brassica oleracea Bo09314s010 I 0.665
evm.TU.supercontig_26.173 Carica papaya evm.TU.supercontig_26.173 I 0.665
orange1.1g026809m.g Citrus sinensis orange1.1g026809m.g I 0.665
WOX10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001761 I 0.665
TCM_034409 Theobroma cacao TCM_034409 I 0.665
Bo7g061410 Brassica oleracea Bo7g061410 I 0.665
cassava39214.m1 Manihot esculenta cassava39214.m1 I 0.664
EuGene.0600010372 Micromonas sp RCC299 EuGene.0600010372 I 0.661
30170.m014389 Ricinus communis 30170.m014389 I 0.661
AMTR_s00044p00155390 Amborella trichopoda AMTR_s00044p00155390 I 0.659
Ca_04823 Cicer arietinum Ca_04823 I 0.659
Gorai.003G002200 Gossypium raimondii Gorai.003G002200 I 0.659
MTR_1g115315 Medicago truncatula MTR_1g115315 I 0.659
Ca_18623 Cicer arietinum Ca_18623 I 0.659
chr1.CM0113.620.nc Lotus japonicus chr1.CM0113.620.nc I 0.659
Aquca_007_00901 Aquilegia coerulea Aquca_007_00901 I 0.659
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.659
Thhalv10009917m.g Eutrema salsugineum Thhalv10009917m.g I 0.659
Bra017720 Brassica rapa Bra017720 I 0.659
Pavir.Ea03245 Panicum virgatum Pavir.Ea03245 I 0.657
orange1.1g022516m.g Citrus sinensis orange1.1g022516m.g I 0.657
VIT_18s0122g01140 Vitis vinifera VIT_18s0122g01140 I 0.657
TRIUR3_23636 Triticum urartu TRIUR3_23636 I 0.657
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.657
Ca_19383 Cicer arietinum Ca_19383 I 0.657
Ca_19386 Cicer arietinum Ca_19386 I 0.657
Pm026793 Prunus mume Pm026793 I 0.657
29830.m001452 Ricinus communis 29830.m001452 I 0.657
Pm022951 Prunus mume Pm022951 I 0.657
Cla023819 Citrullus lanatus Cla023819 I 0.657
Cla009089 Citrullus lanatus Cla009089 I 0.657
Traes_3DS_97BBFFA03 Triticum aestivum Traes_3DS_97BBFFA03 I 0.657
TRAES3BF091200090CFD_g Triticum aestivum TRAES3BF091200090CFD_g I 0.657
HB-4 Arabidopsis lyrata scaffold_700564.1 I 0.657
SELMODRAFT_404178 Selaginella moellendorffii SELMODRAFT_404178 I 0.657
Sb03g038080 Sorghum bicolor Sb03g038080 I 0.657
PRUPE_ppa021400mg Prunus persica PRUPE_ppa021400mg I 0.657
PRUPE_ppa011225mg Prunus persica PRUPE_ppa011225mg I 0.657
SELMODRAFT_407157 Selaginella moellendorffii SELMODRAFT_407157 I 0.657
Si002508m.g Setaria italica Si002508m.g I 0.657
Traes_3AL_D0053C177 Triticum aestivum Traes_3AL_D0053C177 I 0.657
TRAES3BF091200100CFD_g Triticum aestivum TRAES3BF091200100CFD_g I 0.657
Pavir.Eb03552 Panicum virgatum Pavir.Eb03552 I 0.657
TCM_000062 Theobroma cacao TCM_000062 I 0.657
Solyc02g082670.2 Solanum lycopersicum Solyc02g082670.2 I 0.657
Traes_3DL_6B1815F7D Triticum aestivum Traes_3DL_6B1815F7D I 0.657
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.657
Lus10040447.g Linum usitatissimum Lus10040447.g I 0.657
Lus10023561.g Linum usitatissimum Lus10023561.g I 0.657
POPTR_0005s27410 Populus trichocarpa POPTR_0005s27410 I 0.657
MDP0000224466 Malus domestica MDP0000224466 I 0.657
LjT41B11.90.nd Lotus japonicus LjT41B11.90.nd I 0.657
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.657
Ciclev10026199m.g Citrus clementina Ciclev10026199m.g I 0.657
Eucgr.I02222 Eucalyptus grandis Eucgr.I02222 I 0.657
PK14252.1 Cannabis sativa PK14252.1 I 0.657
Gorai.001G199200 Gossypium raimondii Gorai.001G199200 I 0.657
gene13035-v1.0-hybrid Fragaria vesca gene13035-v1.0-hybrid I 0.657
evm.TU.supercontig_6.368 Carica papaya evm.TU.supercontig_6.368 I 0.657
SapurV1A.0266s0300 Salix purpurea SapurV1A.0266s0300 I 0.657
PDK_20s1408301g001 Phoenix dactylifera PDK_20s1408301g001 I 0.657
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.657
Cucsa.323040 Cucumis sativus Cucsa.323040 I 0.657
fgenesh1_pg.scaffold_217000007 Physcomitrella patens fgenesh1_pg.scaffold_217000007 I 0.657
Cucsa.272210 Cucumis sativus Cucsa.272210 I 0.657
MDP0000316517 Malus domestica MDP0000316517 I 0.657
MDP0000851699 Malus domestica MDP0000851699 I 0.657
gw1.224.39.1 Physcomitrella patens gw1.224.39.1 I 0.657
gw1.29.10.1 Physcomitrella patens gw1.29.10.1 I 0.657
MDP0000304650 Malus domestica MDP0000304650 I 0.657
Bostr.7867s1413 Boechera stricta Bostr.7867s1413 I 0.657
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.657
SapurV1A.0016s0590 Salix purpurea SapurV1A.0016s0590 I 0.657
mgf006573m Mimulus guttatus mgf006573m I 0.657
PK07880.1 Cannabis sativa PK07880.1 I 0.657
TRAES3BF057600060CFD_g Triticum aestivum TRAES3BF057600060CFD_g I 0.657
GLYMA20G23220 Glycine max GLYMA20G23220 I 0.657
GLYMA18G52491 Glycine max GLYMA18G52491 I 0.657
OMERI01G32310 Oryza meridionalis OMERI01G32310 I 0.657
GRMZM2G038252 Zea mays GRMZM2G038252 D 0.657
OLONG_016784 Oryza longistaminata OLONG_016784 I 0.657
GLYMA10G43580 Glycine max GLYMA10G43580 I 0.657
ONIVA01G40180 Oryza nivara ONIVA01G40180 I 0.657
GLYMA02G10410 Glycine max GLYMA02G10410 I 0.657
ORGLA01G0290300 Oryza glaberrima ORGLA01G0290300 I 0.657
GLYMA04G01830 Glycine max GLYMA04G01830 I 0.657
OPUNC01G34140 Oryza punctata OPUNC01G34140 I 0.657
GRMZM2G069274 Zea mays GRMZM2G069274 I 0.657
GRMZM5G805026 Zea mays GRMZM5G805026 I 0.657
MLOC_56124 Hordeum vulgare MLOC_56124 I 0.657
LPERR01G30370 Leersia perrieri LPERR01G30370 I 0.657
GSMUA_AchrUn_randomG18610_001 Musa acuminata GSMUA_AchrUn_randomG18610_001 I 0.657
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.657
MTR_3g115620 Medicago truncatula MTR_3g115620 I 0.657
GSMUA_Achr5G11080_001 Musa acuminata GSMUA_Achr5G11080_001 I 0.657
OBART01G35170 Oryza barthii OBART01G35170 I 0.657
GSMUA_Achr1G17980_001 Musa acuminata GSMUA_Achr1G17980_001 I 0.657
OB01G44030 Oryza brachyantha OB01G44030 I 0.657
GSMUA_Achr4G25530_001 Musa acuminata GSMUA_Achr4G25530_001 I 0.657
F775_11596 Aegilops tauschii F775_11596 I 0.657
GLYMA06G01940 Glycine max GLYMA06G01940 I 0.657
Bo7g117480 Brassica oleracea Bo7g117480 I 0.657
WOX8 Oryza sativa OS01G0818400 I 0.657
Bra011623 Brassica rapa Bra011623 I 0.657
PGSC0003DMG400001565 Solanum tuberosum PGSC0003DMG400001565 I 0.657
POPTR_0002s00980 Populus trichocarpa POPTR_0002s00980 I 0.657
Bo1g006370 Brassica oleracea Bo1g006370 I 0.657
BGIOSGA004695 Oryza indica BGIOSGA004695 I 0.657
BRADI2G53390 Brachypodium distachyon BRADI2G53390 I 0.657
ORUFI01G38500 Oryza rufipogon ORUFI01G38500 I 0.657
WOX13 Arabidopsis thaliana AT4G35550 D 0.657
SELMODRAFT_419270 Selaginella moellendorffii SELMODRAFT_419270 I 0.646
SELMODRAFT_417553 Selaginella moellendorffii SELMODRAFT_417553 I 0.644
estExt_fgenesh1_pg.C_90244 Micromonas pusilla estExt_fgenesh1_pg.C_90244 I 0.641
MTR_4g084550 Medicago truncatula MTR_4g084550 I 0.639
LPERR12G00390 Leersia perrieri LPERR12G00390 I 0.637
Sb05g003490 Sorghum bicolor Sb05g003490 I 0.637
OB05G19220 Oryza brachyantha OB05G19220 I 0.637
Pavir.J34412 Panicum virgatum Pavir.J34412 I 0.637
Pavir.J24082 Panicum virgatum Pavir.J24082 I 0.637
WOX3 Oryza indica BGIOSGA036831 I 0.637
GSMUA_Achr2G16080_001 Musa acuminata GSMUA_Achr2G16080_001 I 0.637
LPERR11G00110 Leersia perrieri LPERR11G00110 I 0.637
GSMUA_Achr7G18230_001 Musa acuminata GSMUA_Achr7G18230_001 I 0.637
GSMUA_Achr4G30610_001 Musa acuminata GSMUA_Achr4G30610_001 I 0.637
GSMUA_Achr8G02040_001 Musa acuminata GSMUA_Achr8G02040_001 I 0.637
MLOC_7772 Hordeum vulgare MLOC_7772 I 0.637
OS12G0101600 Oryza sativa OS12G0101600 I 0.637
OBART11G00060 Oryza barthii OBART11G00060 I 0.637
ONIVA11G00010 Oryza nivara ONIVA11G00010 I 0.637
Traes_5BL_2E6FA4A97 Triticum aestivum Traes_5BL_2E6FA4A97 I 0.637
Traes_5DL_193218298 Triticum aestivum Traes_5DL_193218298 I 0.637
GSMUA_Achr9G04090_001 Musa acuminata GSMUA_Achr9G04090_001 I 0.637
ONIVA12G00010 Oryza nivara ONIVA12G00010 I 0.637
Si012474m.g Setaria italica Si012474m.g I 0.637
F775_52565 Aegilops tauschii F775_52565 I 0.637
OPUNC12G00190 Oryza punctata OPUNC12G00190 I 0.637
Si027421m.g Setaria italica Si027421m.g I 0.637
OPUNC11G00180 Oryza punctata OPUNC11G00180 I 0.637
ORGLA11G0000600 Oryza glaberrima ORGLA11G0000600 I 0.637
ORUFI04G30250 Oryza rufipogon ORUFI04G30250 I 0.637
OGLUM11G00100 Oryza glumaepatula OGLUM11G00100 I 0.637
OMERI11G00160 Oryza meridionalis OMERI11G00160 I 0.637
GRMZM2G069028 Zea mays GRMZM2G069028 I 0.637
OS11G0102100 Oryza sativa OS11G0102100 I 0.637
OLONG_026278 Oryza longistaminata OLONG_026278 I 0.637
OGLUM12G00010 Oryza glumaepatula OGLUM12G00010 I 0.637
Traes_3AS_9079D6B71 Triticum aestivum Traes_3AS_9079D6B71 I 0.635
SELMODRAFT_438787 Selaginella moellendorffii SELMODRAFT_438787 I 0.635
GSMUA_Achr7G04050_001 Musa acuminata GSMUA_Achr7G04050_001 I 0.635
MTR_7g023810 Medicago truncatula MTR_7g023810 I 0.635
SELMODRAFT_451355 Selaginella moellendorffii SELMODRAFT_451355 I 0.635
GSMUA_Achr4G29470_001 Musa acuminata GSMUA_Achr4G29470_001 I 0.633
GSMUA_Achr3G14840_001 Musa acuminata GSMUA_Achr3G14840_001 I 0.631
Aquca_015_00333 Aquilegia coerulea Aquca_015_00333 I 0.626
Bo3g155580 Brassica oleracea Bo3g155580 I 0.624
Bra010531 Brassica rapa Bra010531 I 0.624
TRIUR3_16981 Triticum urartu TRIUR3_16981 I 0.621
PGSC0003DMG400025358 Solanum tuberosum PGSC0003DMG400025358 I 0.618
Solyc11g072770.1 Solanum lycopersicum Solyc11g072770.1 I 0.618
Ciclev10017657m.g Citrus clementina Ciclev10017657m.g I 0.607
WOX1 Vitis vinifera VIT_01s0011g05020 I 0.607
Ca_06508 Cicer arietinum Ca_06508 I 0.607
GLYMA07G34425 Glycine max GLYMA07G34425 I 0.607
Gorai.002G178400 Gossypium raimondii Gorai.002G178400 I 0.607
GLYMA20G02161 Glycine max GLYMA20G02161 I 0.607
evm.TU.supercontig_65.159 Carica papaya evm.TU.supercontig_65.159 I 0.607
orange1.1g035594m.g Citrus sinensis orange1.1g035594m.g I 0.607
mgf021746m Mimulus guttatus mgf021746m I 0.607
cassava32199.m1 Manihot esculenta cassava32199.m1 I 0.607
WOX1 Populus trichocarpa POPTR_0010s12150 I 0.607
LjSGA_059316.1 Lotus japonicus LjSGA_059316.1 I 0.607
cassava13526.valid.m1 Manihot esculenta cassava13526.valid.m1 I 0.607
29816.m000691 Ricinus communis 29816.m000691 I 0.607
TCM_010888 Theobroma cacao TCM_010888 I 0.607
SapurV1A.0351s0200 Salix purpurea SapurV1A.0351s0200 I 0.606
Bra022267 Brassica rapa Bra022267 I 0.606
MDP0000445859 Malus domestica MDP0000445859 I 0.606
fgenesh2_kg.143__1__AT3G18010.1 Arabidopsis lyrata fgenesh2_kg.143__1__AT3G18010.1 I 0.606
Bostr.19424s0870 Boechera stricta Bostr.19424s0870 I 0.606
orange1.1g039144m.g Citrus sinensis orange1.1g039144m.g I 0.606
orange1.1g043602m.g Citrus sinensis orange1.1g043602m.g I 0.606
Solyc03g118770.2 Solanum lycopersicum Solyc03g118770.2 I 0.606
PGSC0003DMG400005670 Solanum tuberosum PGSC0003DMG400005670 I 0.606
Bra001694 Brassica rapa Bra001694 I 0.606
POPTR_0015s04520 Populus trichocarpa POPTR_0015s04520 I 0.606
PRUPE_ppa017419mg Prunus persica PRUPE_ppa017419mg I 0.606
PK07906.1 Cannabis sativa PK07906.1 I 0.606
chr4.CM0042.2350.nc Lotus japonicus chr4.CM0042.2350.nc I 0.606
POPTR_0012s04510 Populus trichocarpa POPTR_0012s04510 I 0.606
WOX1 Arabidopsis thaliana AT3G18010 I 0.606
LjSGA_115909.1 Lotus japonicus LjSGA_115909.1 I 0.606
Bo3g071360 Brassica oleracea Bo3g071360 I 0.606
Aquca_091_00003 Aquilegia coerulea Aquca_091_00003 I 0.606
SapurV1A.0718s0010 Salix purpurea SapurV1A.0718s0010 I 0.606
SapurV1A.0406s0010 Salix purpurea SapurV1A.0406s0010 I 0.606
fgenesh2_kg.3__1989__AT3G18010.1 Arabidopsis lyrata fgenesh2_kg.3__1989__AT3G18010.1 I 0.606
SapurV1A.2168s0010 Salix purpurea SapurV1A.2168s0010 I 0.606
Thhalv10022042m.g Eutrema salsugineum Thhalv10022042m.g I 0.606
Bo5g121370 Brassica oleracea Bo5g121370 I 0.606
SapurV1A.0357s0040 Salix purpurea SapurV1A.0357s0040 I 0.606
Lus10042007.g Linum usitatissimum Lus10042007.g I 0.606
Ciclev10030293m.g Citrus clementina Ciclev10030293m.g I 0.606
Cla019215 Citrullus lanatus Cla019215 I 0.606
Ciclev10008783m.g Citrus clementina Ciclev10008783m.g I 0.606
Eucgr.B00945 Eucalyptus grandis Eucgr.B00945 I 0.606
Cla018739 Citrullus lanatus Cla018739 I 0.606
evm.TU.supercontig_3.402 Carica papaya evm.TU.supercontig_3.402 I 0.606
Ca_10352 Cicer arietinum Ca_10352 I 0.606
Pm025084 Prunus mume Pm025084 I 0.606
Carubv10013929m.g Capsella rubella Carubv10013929m.g I 0.606
cassava41581.m1 Manihot esculenta cassava41581.m1 I 0.606
Cucsa.111520 Cucumis sativus Cucsa.111520 I 0.606
Cagra.0456s0008 Capsella grandiflora Cagra.0456s0008 I 0.606
cassava16590.m1 Manihot esculenta cassava16590.m1 I 0.606
28102.m000106 Ricinus communis 28102.m000106 I 0.606
MTR_8g107210 Medicago truncatula MTR_8g107210 I 0.606
VIT_17s0000g02460 Vitis vinifera VIT_17s0000g02460 I 0.606
gene09389-v1.0-hybrid Fragaria vesca gene09389-v1.0-hybrid I 0.606
GLYMA07G11372 Glycine max GLYMA07G11372 I 0.606
Gorai.009G103500 Gossypium raimondii Gorai.009G103500 I 0.606
Lus10018011.g Linum usitatissimum Lus10018011.g I 0.606
GLYMA05G33850 Glycine max GLYMA05G33850 I 0.606
Cucsa.121900 Cucumis sativus Cucsa.121900 I 0.606
TCM_012755 Theobroma cacao TCM_012755 I 0.606
MDP0000219162 Malus domestica MDP0000219162 I 0.606
gene30464-v1.0-hybrid Fragaria vesca gene30464-v1.0-hybrid I 0.606
AMTR_s00010p00122680 Amborella trichopoda AMTR_s00010p00122680 I 0.606
GLYMA09G30831 Glycine max GLYMA09G30831 I 0.606
GLYMA08G05831 Glycine max GLYMA08G05831 I 0.606
Gorai.008G289800 Gossypium raimondii Gorai.008G289800 I 0.606
MDP0000144307 Malus domestica MDP0000144307 I 0.606
SELMODRAFT_123325 Selaginella moellendorffii SELMODRAFT_123325 I 0.602
SELMODRAFT_115439 Selaginella moellendorffii SELMODRAFT_115439 I 0.602
VIT_04s0044g00160 Vitis vinifera VIT_04s0044g00160 I 0.601