Si000488m.g (Setaria italica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Si000488m.g T223168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HDG9
M10628_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG9_01
0.601 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si000488m Homeodomain 71 127

Links

Other Homeodomain family TFs
Other Setaria italica TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb03g036820 Sorghum bicolor Sb03g036820 I 0.839
Pavir.Ea03124 Panicum virgatum Pavir.Ea03124 N 0.748
GRMZM2G386276 Zea mays GRMZM2G386276 N 0.721
evm.TU.supercontig_178.19 Carica papaya evm.TU.supercontig_178.19 I 0.639
HDG8 Arabidopsis thaliana AT3G03260 I 0.633
Thhalv10021974m.g Eutrema salsugineum Thhalv10021974m.g I 0.633
OB01G42420 Oryza brachyantha OB01G42420 N 0.630
Bo5g150100 Brassica oleracea Bo5g150100 I 0.629
Bra032003 Brassica rapa Bra032003 I 0.629
Bo2g018400 Brassica oleracea Bo2g018400 I 0.629
Bra020066 Brassica rapa Bra020066 I 0.629
Carubv10002574m.g Capsella rubella Carubv10002574m.g I 0.628
Cagra.4849s0002 Capsella grandiflora Cagra.4849s0002 I 0.628
Bo1g154790 Brassica oleracea Bo1g154790 I 0.627
SELMODRAFT_450555 Selaginella moellendorffii SELMODRAFT_450555 I 0.625
GLYMA08G21890 Glycine max GLYMA08G21890 I 0.625
SELMODRAFT_450557 Selaginella moellendorffii SELMODRAFT_450557 I 0.625
GLYMA07G02220 Glycine max GLYMA07G02220 I 0.625
Cagra.2098s0060 Capsella grandiflora Cagra.2098s0060 I 0.624
Carubv10015764m.g Capsella rubella Carubv10015764m.g I 0.624
Bo6g069620 Brassica oleracea Bo6g069620 I 0.616
Bra003213 Brassica rapa Bra003213 I 0.616
OPUNC01G32670 Oryza punctata OPUNC01G32670 N 0.613
Bostr.7867s0363 Boechera stricta Bostr.7867s0363 I 0.612
Pavir.Eb03442 Panicum virgatum Pavir.Eb03442 N 0.611
TCM_025205 Theobroma cacao TCM_025205 I 0.609
AMTR_s00004p00265170 Amborella trichopoda AMTR_s00004p00265170 I 0.609
OMERI01G30450 Oryza meridionalis OMERI01G30450 N 0.609
ONIVA01G38360 Oryza nivara ONIVA01G38360 N 0.609
OGLUM01G37810 Oryza glumaepatula OGLUM01G37810 N 0.609
OBART01G33600 Oryza barthii OBART01G33600 N 0.609
BGIOSGA004593 Oryza indica BGIOSGA004593 N 0.609
ORUFI01G36780 Oryza rufipogon ORUFI01G36780 N 0.609
ORGLA01G0275300 Oryza glaberrima ORGLA01G0275300 N 0.609
evm.TU.supercontig_178.20 Carica papaya evm.TU.supercontig_178.20 I 0.608
Solyc11g011940.1 Solanum lycopersicum Solyc11g011940.1 I 0.604
Cagra.3356s0062 Capsella grandiflora Cagra.3356s0062 I 0.604
SapurV1A.0231s0010 Salix purpurea SapurV1A.0231s0010 I 0.603
Cucsa.108510 Cucumis sativus Cucsa.108510 I 0.603
Cla013352 Citrullus lanatus Cla013352 I 0.603
HDG9 Arabidopsis thaliana AT5G17320 D 0.601
cassava38731.m1 Manihot esculenta cassava38731.m1 I 0.601
Bostr.19046s0037 Boechera stricta Bostr.19046s0037 I 0.601
TCM_017892 Theobroma cacao TCM_017892 I 0.601
Thhalv10015677m.g Eutrema salsugineum Thhalv10015677m.g I 0.599