Si006358m.g (Setaria italica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Si006358m.g T223180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.864 0.800
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.604 0.440
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si006358m Homeodomain 396 448

Links

Other Homeodomain family TFs
Other Setaria italica TFs

953 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WUBG_03758 Wuchereria bancrofti WUBG_03758 N 0.000
L889_g21858 Steinernema feltiae L889_g21858 N 0.000
L892_g27212 Steinernema scapterisci L892_g27212 N 0.000
L893_g27569 Steinernema glaseri L893_g27569 N 0.000
L898_g616 Steinernema monticolum L898_g616 N 0.000
nAv.1.0.1.g00516 Acanthocheilonema viteae nAv.1.0.1.g00516 N 0.000
nDi.2.2.2.g01644 Dirofilaria immitis nDi.2.2.2.g01644 N 0.000
NECAME_02209 Necator americanus NECAME_02209 N 0.000
nLs.2.1.2.g03512 Litomosoides sigmodontis nLs.2.1.2.g03512 N 0.000
PTRK_0000278100 Parastrongyloides trichosuri PTRK_0000278100 N 0.000
PTRK_0001321400 Parastrongyloides trichosuri PTRK_0001321400 N 0.000
RSKR_0000919500 Rhabditophanes kr3021 RSKR_0000919500 N 0.000
SPAL_0001235900 Strongyloides papillosus SPAL_0001235900 N 0.000
SPAL_0001311500 Strongyloides papillosus SPAL_0001311500 N 0.000
SSTP_0000280500 Strongyloides stercoralis SSTP_0000280500 N 0.000
SSTP_0000575300 Strongyloides stercoralis SSTP_0000575300 N 0.000
SVE_0150100 Strongyloides venezuelensis SVE_0150100 N 0.000
L596_g8102 Steinernema carpocapsae L596_g8102 N 0.000
HCOI01581600 Haemonchus contortus HCOI01581600 N 0.000
GPUH_0001467201 Gongylonema pulchrum GPUH_0001467201 N 0.000
Bm4516 Brugia malayi Bm4516 N 0.000
CBG12652 Caenorhabditis briggsae CBG12652 N 0.000
CBN08911 Caenorhabditis brenneri CBN08911 N 0.000
CBN31474 Caenorhabditis brenneri CBN31474 N 0.000
CJA17455 Caenorhabditis japonica CJA17455 N 0.000
CRE24738 Caenorhabditis remanei CRE24738 N 0.000
LOAG_10644 Loa loa LOAG_10644 N 0.000
let-607 Caenorhabditis elegans WBGene00002783 N 0.000
ACOC_0000735101 Angiostrongylus costaricensis ACOC_0000735101 N 0.000
ANCCEY_08318 Ancylostoma ceylanicum ANCCEY_08318 N 0.000
ASU_12421 Ascaris suum ASU_12421 N 0.000
BXY_0943600 Bursaphelenchus xylophilus BXY_0943600 N 0.000
DICVIV_10160 Dictyocaulus viviparus DICVIV_10160 N 0.000
DME_0000611701 Dracunculus medinensis DME_0000611701 N 0.000
EEL_0000168701 Elaeophora elaphi EEL_0000168701 N 0.000
GPLIN_001183200 Globodera pallida GPLIN_001183200 N 0.000
SVE_0362500 Strongyloides venezuelensis SVE_0362500 N 0.000