CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si033977m.g
(
Setaria italica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Si033977m.g
T223235_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si033977m
Homeodomain
2
58
ASARTKKSPQQIQMLEKFYSDVQYPKPDEMEQYATCVGLTYSQVRIWFKERRRKERR
Si033979m
Homeodomain
2
58
ASARTKKSPQQIQMLEKFYSDVQYPKPDEMEQYATCVGLTYSQVRIWFKERRRKERR
Links
Other
Homeodomain
family TFs
Other
Setaria italica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib01030
Panicum virgatum
Pavir.Ib01030
N
0.718
Pavir.J13571
Panicum virgatum
Pavir.J13571
N
0.718
Traes_2AS_A117C8692
Triticum aestivum
Traes_2AS_A117C8692
N
0.694
Traes_2BS_2530470BF
Triticum aestivum
Traes_2BS_2530470BF
N
0.694
TRAES3BF066700010CFD_g
Triticum aestivum
TRAES3BF066700010CFD_g
N
0.694
TRIUR3_01802
Triticum urartu
TRIUR3_01802
N
0.694
TRIUR3_27662
Triticum urartu
TRIUR3_27662
N
0.694
Traes_3DS_796E4C73A
Triticum aestivum
Traes_3DS_796E4C73A
N
0.694
F775_28106
Aegilops tauschii
F775_28106
N
0.694
Traes_2DS_199F7B30E
Triticum aestivum
Traes_2DS_199F7B30E
N
0.681
ORUFI07G23500
Oryza rufipogon
ORUFI07G23500
N
0.676
OGLUM07G22360
Oryza glumaepatula
OGLUM07G22360
N
0.676
OBART07G22470
Oryza barthii
OBART07G22470
N
0.676
OB07G27970
Oryza brachyantha
OB07G27970
N
0.676
OS07G0619600
Oryza sativa
OS07G0619600
N
0.676
ONIVA07G21870
Oryza nivara
ONIVA07G21870
N
0.676
BGIOSGA026156
Oryza indica
BGIOSGA026156
N
0.676
OPUNC07G21080
Oryza punctata
OPUNC07G21080
N
0.676
LPERR07G19470
Leersia perrieri
LPERR07G19470
N
0.676
OMERI07G18770
Oryza meridionalis
OMERI07G18770
N
0.674
MLOC_6327
Hordeum vulgare
MLOC_6327
N
0.673