SKUD_178103 (Saccharomyces kudriavzevii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SKUD_178103 T223338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HMLALPHA2
M00915_2.00
Saccharomyces cerevisiae
NNDACRHN

NDYGTHNN
PBM
Gordan et al.(2011)
Hmlalpha2
0.867 1.000
MATALPHA2
M01550_2.00
Saccharomyces cerevisiae
NDNACAAT

ATTGTNHN
PBM
Zhu et al.(2009)
Matalpha2
0.867 1.000
HMRA2
M00055_2.00
Saccharomyces cerevisiae
CRTGTAAW

WTTACAYG
PBM
Badis et al.(2008)
HMRA2_2071
0.867 1.000
HMRA2
M07484_2.00
Saccharomyces cerevisiae
YRTGTAAW

WTTACAYR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0318.1
0.867 1.000
MATALPHA2
M08570_2.00
Saccharomyces cerevisiae
ACAYGH

DCRTGT
Misc
DeBoer et al.(2011)
YCR039C_1364
0.867 1.000
HMRA2
M08571_2.00
Saccharomyces cerevisiae
YRTGTAAW

WTTACAYR
Misc
DeBoer et al.(2011)
YCR096C_558
0.867 1.000
MATALPHA2
M10791_2.00
Saccharomyces cerevisiae
DWNNACAYGN

NCRTGTNNWH
Transfac
Matys et al.(2006)
F$MATALPHA2_01
0.867 1.000
MATALPHA2
M10792_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MATALPHA2_08
0.867 1.000
MATALPHA2
M10793_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MATALPHA2P_Q4
0.867 1.000
MATALPHA2
M10794_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MATALPHA2_Q4
0.867 1.000
MATALPHA2
M02189_2.00
Saccharomyces cerevisiae
NNNDCDNN

NNHGHNNN
PBM
Weirauch et al.(2014)
pTH6506
0.834 0.982
MTAL2_KLUDE
M02197_2.00
Kluyveromyces delphensis
CRTGTAWW

WWTACAYG
PBM
Weirauch et al.(2014)
pTH5974
0.736 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42566 Homeodomain 131 189

Links

Other Homeodomain family TFs
Other Saccharomyces kudriavzevii TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
2269_Multiple Saccharomyces mikatae 2269_Multiple I 0.867
2266_Multiple Saccharomyces mikatae 2266_Multiple I 0.867
2197_Multiple Saccharomyces paradoxus 2197_Multiple I 0.867
2281_YCR096C Saccharomyces mikatae 2281_YCR096C I 0.867
23789_YCR096C Saccharomyces paradoxus 23789_YCR096C I 0.867
2986_YCR096C Saccharomyces bayanus 2986_YCR096C I 0.867
2769_Multiple Saccharomyces paradoxus 2769_Multiple I 0.867
2768_YCR039C Saccharomyces bayanus 2768_YCR039C I 0.867
MATALPHA2 Saccharomyces cerevisiae YCR039C D 0.867
HMRA2 Saccharomyces cerevisiae YCR096C D 0.867
HMLALPHA2 Saccharomyces cerevisiae YCL067C D 0.867
SKUD_204007 Saccharomyces kudriavzevii SKUD_204007 I 0.867
KAFR_0D00720 Kazachstania africana KAFR_0D00720 I 0.764
TPHA_0E03610 Tetrapisispora phaffii TPHA_0E03610 I 0.745
TPHA_0E04070 Tetrapisispora phaffii TPHA_0E04070 I 0.745
Kpol_2002p3 Vanderwaltozyma polyspora Kpol_2002p3 I 0.744
MTAL2_KLUDE Kluyveromyces delphensis MTAL2_KLUDE D 0.736
NDAI_0A00110 Naumovozyma dairenensis NDAI_0A00110 I 0.727
Scas_Contig642.20 Saccharomyces castellii Scas_Contig642.20 I 0.712
NCAS_0B09140 Naumovozyma castellii NCAS_0B09140 I 0.712
ZYRO0F15818g Zygosaccharomyces rouxii ZYRO0F15818g I 0.704
ZYRO0F18568g Zygosaccharomyces rouxii ZYRO0F18568g I 0.704
TDEL_0C07000 Torulaspora delbrueckii TDEL_0C07000 I 0.684
KNAG_0C00160 Kazachstania naganishii KNAG_0C00160 I 0.662