SNOG_10542 (Phaeosphaeria nodorum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SNOG_10542 T223526_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN

NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.788 0.789
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR

YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.619 0.491
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR

YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.619 0.491
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.619 0.491
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.619 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNOT_10542 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Phaeosphaeria nodorum TFs

Invalid Input OrderBy

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action