Solyc02g077590.1 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc02g077590.1 T223550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.670 0.596
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.670 0.596
ATHB-51
M00867_2.00
Arabidopsis thaliana
ATWATKNN

NNMATWAT
PBM
Franco-Zorrilla et al.(2014)
ATHB51
0.668 0.596
ATHB-51
M06927_2.00
Arabidopsis thaliana
DNCAATAATTGAD

HTCAATTATTGNH
Dap-seq
OMalley et al.(2016)
LMI1_col_a
0.668 0.596
ATHB-51
M06928_2.00
Arabidopsis thaliana
NDNCAATAATTGA

TCAATTATTGNHN
Dap-seq
OMalley et al.(2016)
LMI1_colamp_a
0.668 0.596
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.650 0.579
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.650 0.579
ATHB-22
M02041_2.00
Arabidopsis thaliana
NNATAATWWWNNN

NNNWWWATTATNN
PBM
Weirauch et al.(2014)
pTH5883
0.645 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g077590.1.1 Homeodomain 14 70

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

Invalid Input OrderBy

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action