SPU_004366 (Strongylocentrotus purpuratus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SPU_004366 T223679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.717 0.226
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.717 0.226
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.717 0.226
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.717 0.226
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB

VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.695 0.419
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_004366-tr Homeodomain 90 135
SPU_004366-tr Homeodomain 147 162

Links

Other Homeodomain family TFs
Other Strongylocentrotus purpuratus TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.000
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.000
Ca_06386 Cicer arietinum Ca_06386 I 0.000
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.000
Cla013743 Citrullus lanatus Cla013743 I 0.000
Cla019977 Citrullus lanatus Cla019977 I 0.000
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.000
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.000
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.000
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.000
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.000
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.000
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
MDP0000249969 Malus domestica MDP0000249969 I 0.000
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.000
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.000
PK20225.1 Cannabis sativa PK20225.1 D 0.000
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.000
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.000
TCM_029711 Theobroma cacao TCM_029711 I 0.000
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.000