Traes_2AL_48B239DD6 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_2AL_48B239DD6 T224123_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATML1
M02048_2.00
Arabidopsis thaliana
NNHNRHYRNN

NNYRDYNDNN
PBM
Weirauch et al.(2014)
pTH8203
0.843 0.912
ATML1
M10626_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ML1_01
0.843 0.912
PDF2
M06921_2.00
Arabidopsis thaliana
WNVGAATATTCYHTN

NADRGAATATTCBNW
Dap-seq
OMalley et al.(2016)
PDF2_col
0.831 0.895
PDF2
M10625_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PDF2_01
0.831 0.895
PK24181.1
M01252_2.00
Cannabis sativa
NNNNNNNHDH

DHDNNNNNNN
PBM
Lambert et al.(2019)
pTH11300
0.821 0.772
HDG11
M02039_2.00
Arabidopsis thaliana
DCATTWAWKD

HMWTWAATGH
PBM
Weirauch et al.(2014)
pTH7664
0.804 0.737
HDG11
M06904_2.00
Arabidopsis thaliana
DCATTWAWTRH

DYAWTWAATGH
Dap-seq
OMalley et al.(2016)
EDT1_col
0.804 0.737
HDG1
M06917_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_col100_a
0.802 0.719
HDG1
M06918_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_colamp_a
0.802 0.719
HDG9
M10628_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG9_01
0.802 0.649
ANL2
M02046_2.00
Arabidopsis thaliana
NCATTWATKNN

NNMATWAATGN
PBM
Weirauch et al.(2014)
pTH8244
0.786 0.754
ANL2
M06919_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
ANL2_col_a
0.786 0.754
ANL2
M06920_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
ANL2_colamp_a
0.786 0.754
HDG7
M06931_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG7_col_a
0.744 0.684
HDG7
M10629_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG7_01
0.744 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2AL_48B239DD6.1 Homeodomain 115 172

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GB53235 Apis mellifera GB53235 I 0.000
KGM_07948 Danaus plexippus KGM_07948 I 0.000
GF18422 Drosophila ananassae FBgn0095440 I 0.000
GG17387 Drosophila erecta FBgn0109613 I 0.000
GH13982 Drosophila grimshawi FBgn0121458 I 0.000
sage Drosophila melanogaster FBgn0037672 D 0.000
GI22327 Drosophila mojavensis FBgn0145055 I 0.000
GA11935 Drosophila pseudoobscura FBgn0071984 I 0.000
GM26275 Drosophila sechellia FBgn0181130 I 0.000
GD20810 Drosophila simulans FBgn0192273 I 0.000
GJ10515 Drosophila virilis FBgn0197795 I 0.000
GK12985 Drosophila willistoni FBgn0214994 I 0.000
GE24791 Drosophila yakuba FBgn0241893 I 0.000
LCUP003587 Lucilia cuprina LCUP003587 I 0.000
MDOA001849 Musca domestica MDOA001849 I 0.000
NV31351 Nasonia vitripennis NV31351 I 0.000