VDAG_03007 (Verticillium dahliae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VDAG_03007 T224474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU03266
M02224_2.00
Neurospora crassa
NNBWWAKDRN

NYHMTWWVNN
PBM
Weirauch et al.(2014)
pTH8814
0.860 0.842
FGRRES_01100
M02131_2.00
Fusarium graminearum
WTTAATTR

YAATTAAW
PBM
Weirauch et al.(2014)
pTH5438
0.796 0.842
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN

NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.610 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY21567 Homeodomain 77 133

Links

Other Homeodomain family TFs
Other Verticillium dahliae TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.000
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.000
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.000
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.000
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.000
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N 0.000
Solyc11g013480.1 Solanum lycopersicum Solyc11g013480.1 N 0.000
Si021833m.g Setaria italica Si021833m.g N 0.000
PGSC0003DMG400027798 Solanum tuberosum PGSC0003DMG400027798 N 0.000
OPUNC04G28180 Oryza punctata OPUNC04G28180 N 0.000
OB04G37650 Oryza brachyantha OB04G37650 N 0.000
GRMZM5G808366 Zea mays GRMZM5G808366 N 0.000
GRMZM2G023813 Zea mays GRMZM2G023813 N 0.000
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.000
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N 0.000
Bra003665 Brassica rapa Bra003665 N 0.000
Bo6g081980 Brassica oleracea Bo6g081980 N 0.000