CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00856
(
Verticillium alfalfae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
VDBG_00856
T224483_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_17238
M02136_2.00
Fusarium graminearum
NNNDRCDNNN
NNNHGYHNNN
PBM
Weirauch et al.(2014)
pTH5505
0.843
0.925
FGRRES_17152
M02135_2.00
Fusarium graminearum
CATGTCAW
WTGACATG
PBM
Weirauch et al.(2014)
pTH6014
0.637
0.679
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY14747
Homeodomain
224
279
ARFSRESVKILKTWLSGHNRHPYPSDEEKEMLQRQTGLNKTQITNWLANARRRGKI
Links
Other
Homeodomain
family TFs
Other
Verticillium alfalfae
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00856
Verticillium albo atrum
VDBG_00856
I
0.867
VDAG_00465
Verticillium dahliae
VDAG_00465
I
0.867
FGRRES_17238
Fusarium graminearum
FGRRES_17238
D
0.843
UV8b_5932
Ustilaginoidea virens
UV8b_5932
I
0.843
FFUJ_04435
Fusarium fujikuroi
FFUJ_04435
I
0.843
GLRG_08361
Colletotrichum graminicola
GLRG_08361
I
0.843
FVEG_04119
Fusarium verticillioides
FVEG_04119
I
0.843
CH063_05452
Colletotrichum higginsianum
CH063_05452
I
0.843
CSUB01_02000
Colletotrichum sublineola
CSUB01_02000
I
0.843
CGGC5_14308
Colletotrichum gloeosporioides
CGGC5_14308
I
0.843
ACRE_004430
Acremonium chrysogenum
ACRE_004430
I
0.830
Bcin06g06480
Botrytis cinerea
Bcin06g06480
I
0.813
SS1G_03098
Sclerotinia sclerotiorum
SS1G_03098
I
0.809
VHEMI03354
Torrubiella hemipterigena
VHEMI03354
I
0.803
OIDMADRAFT_141009
Oidiodendron maius
OIDMADRAFT_141009
I
0.784
CMQ_3175
Grosmannia clavigera
CMQ_3175
I
0.782
F503_02949
Ophiostoma piceae uamh
F503_02949
I
0.780
SPBR_00057
Sporothrix brasiliensis
SPBR_00057
I
0.780
HMPREF1624_05953
Sporothrix schenckii
HMPREF1624_05953
I
0.780
MAPG_01731
Magnaporthe poae
MAPG_01731
I
0.748
GGTG_02769
Gaeumannomyces graminis
GGTG_02769
I
0.748
MYCTH_122893
Myceliophthora thermophila
MYCTH_122893
I
0.688
PDIP_88440
Penicillium digitatum
PDIP_88440
I
0.682
FOXG_05651
Fusarium oxysporum
FOXG_05651
I
0.671
FOXG_08967
Fusarium oxysporum
FOXG_08967
I
0.637
FVEG_06579
Fusarium verticillioides
FVEG_06579
I
0.637
FFUJ_09085
Fusarium fujikuroi
FFUJ_09085
I
0.637
FGRRES_17152
Fusarium graminearum
FGRRES_17152
D
0.637
TRIREDRAFT_119826
Trichoderma reesei
TRIREDRAFT_119826
I
0.633
VDAG_07897
Verticillium dahliae
VDAG_07897
I
0.631
SAPIO_CDS1962
Scedosporium apiospermum
SAPIO_CDS1962
I
0.608
DOTSEDRAFT_78718
Dothistroma septosporum
DOTSEDRAFT_78718
I
0.606
EPUS_00089
Endocarpon pusillum
EPUS_00089
I
0.603