CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ceh-58
(
Caenorhabditis elegans
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
WBGene00007417
T224651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-58
M00676_2.00
Caenorhabditis elegans
NNTAATTRNN
NNYAATTANN
PBM
Narasimhan et al.(2015)
pTH9923
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00676_2.00
Homeodomain
51
109
RRGRIVYSTQELNILEKYYEEDPNACADPRKRETMCKTLSIDYHRLKVWFQNRRRKDKV
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C07E3.6
Homeodomain
250
308
RRGRIVYSTQELNILEKYYEEDPNACADPRKRETMCKTLSIDYHRLKVWFQNRRRKDKV
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN10640
Caenorhabditis brenneri
CBN10640
I
0.863
CBG02738
Caenorhabditis briggsae
CBG02738
I
0.858
CRE02070
Caenorhabditis remanei
CRE02070
I
0.855
ENSTBEG00000007985
Tupaia belangeri
ENSTBEG00000007985
I
0.600
HCOI00303400
Haemonchus contortus
HCOI00303400
I
0.599