CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_003689450.1
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
XP_003689450.1
T224749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_003689450.1
M00535_2.00
Mus musculus
NDDAKMYNNN
NNNRKMTHHN
PBM
Berger et al.(2008)
Dobox4_3956
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00535_2.00
Homeodomain
17
73
RKKRNMPSIEQKLVLKEHFDESKYLNKEQCKSLAQKLGMKEKQIKTHFKNKRARERR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_003689450.1
Homeodomain
20
76
RKKRNMPSIEQKLVLKEHFDESKYLNKEQCKSLAQKLGMKEKQIKTHFKNKRARERR
Links
Other
Homeodomain
family TFs
Other
Mus musculus
TFs
0 Related TFs
">No related TF found