MATALPHA2 (Saccharomyces cerevisiae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 YCR039C T224756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MATALPHA2
M01550_2.00		 Saccharomyces cerevisiae
NDNACAAT
ATTGTNHN		 PBM
Zhu et al.(2009)
Matalpha2		 (Direct) (Direct)
MATALPHA2
M02189_2.00		 Saccharomyces cerevisiae
NNNDCDNN
NNHGHNNN		 PBM
Weirauch et al.(2014)
pTH6506		 (Direct) (Direct)
MATALPHA2
M08570_2.00		 Saccharomyces cerevisiae
ACAYGH
DCRTGT		 Misc
DeBoer et al.(2011)
YCR039C_1364		 (Direct) (Direct)
MATALPHA2
M10791_2.00		 Saccharomyces cerevisiae
DWNNACAYGN
NCRTGTNNWH		 Transfac
Matys et al.(2006)
F$MATALPHA2_01		 (Direct) (Direct)
MATALPHA2
M10792_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2_08		 (Direct) (Direct)
MATALPHA2
M10793_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2P_Q4		 (Direct) (Direct)
MATALPHA2
M10794_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MATALPHA2_Q4		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMLALPHA2
M00915_2.00 		Saccharomyces cerevisiae
NNDACRHN
NDYGTHNN		 PBM
Gordan et al.(2011)
Hmlalpha2 		0.867 1.000
HMRA2
M00055_2.00 		Saccharomyces cerevisiae
CRTGTAAW
WTTACAYG		 PBM
Badis et al.(2008)
HMRA2_2071 		0.867 1.000
HMRA2
M07484_2.00 		Saccharomyces cerevisiae
YRTGTAAW
WTTACAYR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0318.1 		0.867 1.000
HMRA2
M08571_2.00 		Saccharomyces cerevisiae
YRTGTAAW
WTTACAYR		 Misc
DeBoer et al.(2011)
YCR096C_558 		0.867 1.000
MTAL2_KLUDE
M02197_2.00 		Kluyveromyces delphensis
CRTGTAWW
WWTACAYG		 PBM
Weirauch et al.(2014)
pTH5974 		0.736 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01550_2.00 Homeodomain 131 189
M02189_2.00 Homeodomain 1 58

DNA Binding Domains

Protein ID Domain From To Sequence
YCR039C Homeodomain 131 189

Links

Other Homeodomain family TFs
Other Saccharomyces cerevisiae TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
2269_Multiple Saccharomyces mikatae 2269_Multiple I 0.867
2266_Multiple Saccharomyces mikatae 2266_Multiple I 0.867
2197_Multiple Saccharomyces paradoxus 2197_Multiple I 0.867
2281_YCR096C Saccharomyces mikatae 2281_YCR096C I 0.867
23789_YCR096C Saccharomyces paradoxus 23789_YCR096C I 0.867
2986_YCR096C Saccharomyces bayanus 2986_YCR096C I 0.867
2769_Multiple Saccharomyces paradoxus 2769_Multiple I 0.867
2768_YCR039C Saccharomyces bayanus 2768_YCR039C I 0.867
HMLALPHA2 Saccharomyces cerevisiae YCL067C D 0.867
HMRA2 Saccharomyces cerevisiae YCR096C D 0.867
SKUD_204007 Saccharomyces kudriavzevii SKUD_204007 I 0.867
SKUD_178103 Saccharomyces kudriavzevii SKUD_178103 I 0.867
KAFR_0D00720 Kazachstania africana KAFR_0D00720 I 0.764
TPHA_0E04070 Tetrapisispora phaffii TPHA_0E04070 I 0.745
TPHA_0E03610 Tetrapisispora phaffii TPHA_0E03610 I 0.745
Kpol_2002p3 Vanderwaltozyma polyspora Kpol_2002p3 I 0.744
MTAL2_KLUDE Kluyveromyces delphensis MTAL2_KLUDE D 0.736
NDAI_0A00110 Naumovozyma dairenensis NDAI_0A00110 I 0.727
Scas_Contig642.20 Saccharomyces castellii Scas_Contig642.20 I 0.712
NCAS_0B09140 Naumovozyma castellii NCAS_0B09140 I 0.712
ZYRO0F15818g Zygosaccharomyces rouxii ZYRO0F15818g I 0.704
ZYRO0F18568g Zygosaccharomyces rouxii ZYRO0F18568g I 0.704
TDEL_0C07000 Torulaspora delbrueckii TDEL_0C07000 I 0.684
KNAG_0C00160 Kazachstania naganishii KNAG_0C00160 I 0.662