CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_493070
(
Trichomonas vaginalis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
TVAG_493070
T224900_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_493070
M02194_2.00
Trichomonas vaginalis
NNTGATGTRDN
NHYACATCANN
PBM
Weirauch et al.(2014)
pTH5784
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02194_2.00
Homeodomain
1
58
RKKRFSKSAKQILNDWFENNIKNPYPSKEELAQLTKETGLSLKQLHTYFINKRVRCKQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_493070
Homeodomain
125
182
RKKRFSKSAKQILNDWFENNIKNPYPSKEELAQLTKETGLSLKQLHTYFINKRVRCKQ
Links
Other
Homeodomain
family TFs
Other
Trichomonas vaginalis
TFs
0 Related TFs
">No related TF found