CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014496.1
(
Alligator sinensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Alligator_sinensis_CCG014496.1
T225255_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.613
0.260
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014496.1
Homeodomain
151
195
RKPRTIYSSLQLQALNQRFQQTQYLALPERAELAAQLGLTQTQLQ
Alligator_sinensis_CCG014496.1
Homeodomain
189
239
LTQTQLQALNQRFQQTQYLALPERAELAAQLGLTQTQVKIWFQNKRSKYKK
Links
Other
Homeodomain
family TFs
Other
Alligator sinensis
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy