Alligator_sinensis_CCG014496.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG014496.1 T225255_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB

VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.613 0.260
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG014496.1 Homeodomain 151 195
Alligator_sinensis_CCG014496.1 Homeodomain 189 239

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011917 Calypte anna Aan_R011917 I 0.604
ACUA004306 Anopheles culicifacies ACUA004306 I 0.632
ACUA026833 Anopheles culicifacies ACUA026833 I 0.631
ADAC001468 Anopheles darlingi ADAC001468 I 0.635
ADAC008104 Anopheles darlingi ADAC008104 I 0.638
AFAF008499 Anopheles farauti AFAF008499 I 0.648
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.663
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.665
AMAM000848 Anopheles maculatus AMAM000848 I 0.631
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.648
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.650
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.635
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.628
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.612
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.743
CLEC007171 Cimex lectularius CLEC007171 I 0.664
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.629
D917_01051 Trichinella nativa D917_01051 I 0.742
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.627
DLX3 Bos taurus ENSBTAG00000017409 I 0.758
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.762
DLX4 Bos taurus ENSBTAG00000007353 I 0.772
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.751
drgx Takifugu rubripes ENSTRUG00000013446 I 0.614
ECANG7_01330 Echinococcus canadensis ECANG7_01330 I 0.710
EFV55592 Trichinella spiralis EFV55592 I 0.620
EFV57629 Trichinella spiralis EFV57629 I 0.742
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.608
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.631
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.772
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.610
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.613
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.610
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.624
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.610
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.610
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.772
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.610
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.610
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.605
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.608
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.611
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.641
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.673
GF12207 Drosophila ananassae FBgn0089246 I 0.651
GF13343 Drosophila ananassae FBgn0090375 I 0.742
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.704
GK22877 Drosophila willistoni FBgn0224839 I 0.618
HelroG173001 Helobdella robusta HelroG173001 I 0.640
HMEL006244 Heliconius melpomene HMEL006244 I 0.639
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.621
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.624
L596_g8967 Steinernema carpocapsae L596_g8967 I 0.605
L798_06393 Zootermopsis nevadensis L798_06393 I 0.664
L892_g24303 Steinernema scapterisci L892_g24303 I 0.638
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.620
lhx8b Takifugu rubripes ENSTRUG00000017607 I 0.603
MCINX007054 Melitaea cinxia MCINX007054 I 0.603
MCINX008871 Melitaea cinxia MCINX008871 I 0.613
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.637
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.651
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.610
NEMVEDRAFT_v1g198584 Nematostella vectensis NEMVEDRAFT_v1g198584 I 0.627
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.634
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.610
NOBOX Felis catus ENSFCAG00000004352 I 0.610
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.610
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.610
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.627
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.610
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.613
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.610
NOBOX Homo sapiens ENSG00000106410 D 0.613
NOBOX Canis familiaris ENSCAFG00000003500 I 0.618
NOBOX Equus caballus ENSECAG00000003123 I 0.610
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.636
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.611
Ogr00034 Ophisaurus gracilis Ogr00034 N 0.665
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.604
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.661
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.604
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.654
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.608
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.655
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.630
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.622
T265_14002 Opisthorchis viverrini T265_14002 I 0.606
TC000483 Tribolium castaneum TC000483 I 0.641
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.617
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.619
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.652
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.639
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.656
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.664
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.641
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.665