Brh_R000011 (Buceros rhinoceros)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Brh_R000011 T225298_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOXD4
M05273_2.00 		Homo sapiens
NTMATKRV
BYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX 		0.364 1.000
HOXD4
M05276_2.00 		Homo sapiens
NTAATKRB
VYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX 		0.364 1.000
HOXD4
M05274_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1 		0.364 1.000
HOXD4
M05275_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2 		0.364 1.000
HOXD4
M05277_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1 		0.364 1.000
HOXD4
M05278_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2 		0.364 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R000011 Homeodomain 1 43

Links

Other Homeodomain family TFs
Other Buceros rhinoceros TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gfo_R000008 Geospiza fortis Gfo_R000008 N 0.758
ENSECAG00000002506 Equus caballus ENSECAG00000002506 I 0.747
ANCDUO_19178 Ancylostoma duodenale ANCDUO_19178 N 0.727
ISCW012461 Ixodes scapularis ISCW012461 N 0.727
SCUD_0000383301 Schistosoma curassoni SCUD_0000383301 N 0.715
Ocbimv22024374m.g Octopus bimaculoides Ocbimv22024374m.g N 0.688
snap_masked-nMf.1.1.scaf13062-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf13062-processed-gene-0.2 N 0.672
Ca_23643 Cicer arietinum Ca_23643 N 0.670
ORUFI09G21220 Oryza rufipogon ORUFI09G21220 N 0.667
M407DRAFT_77617 Tulasnella calospora M407DRAFT_77617 N 0.658
LDEC024564 Leptinotarsa decemlineata LDEC024564 N 0.650
ENSTGUG00000011379 Taeniopygia guttata ENSTGUG00000011379 I 0.638
Aan_R007134 Calypte anna Aan_R007134 I 0.638
Aan_R001812 Calypte anna Aan_R001812 N 0.638
Afo_R002867 Aptenodytes forsteri Afo_R002867 I 0.638
Ogr09559 Ophisaurus gracilis Ogr09559 N 0.622
Afo_R002868 Aptenodytes forsteri Afo_R002868 I 0.620
Hba_10731 Heterorhabditis bacteriophora Hba_10731 N 0.609
ANCCAN_25804 Ancylostoma caninum ANCCAN_25804 N 0.604
hoxc6.S Xenopus laevis XB-GENE-865143 I 0.603
WUBG_02755 Wuchereria bancrofti WUBG_02755 N 0.601
CBG05223 Caenorhabditis briggsae CBG05223 N 0.601
AFAF004701 Anopheles farauti AFAF004701 N 0.600
ENSXMAG00000000434 Xiphophorus maculatus ENSXMAG00000000434 I 0.364
Hoxd4 Rattus norvegicus ENSRNOG00000001578 I 0.364
HOXD4 Pan troglodytes ENSPTRG00000012671 I 0.364
ENSPSIG00000003079 Pelodiscus sinensis ENSPSIG00000003079 I 0.364
ENSSHAG00000016086 Sarcophilus harrisii ENSSHAG00000016086 I 0.364
HOXD4 Sus scrofa ENSSSCG00000015984 I 0.364
ENSSTOG00000029055 Ictidomys tridecemlineatus ENSSTOG00000029055 I 0.364
HOXD4 Tursiops truncatus ENSTTRG00000013778 I 0.364
Cmyd_10010791 Chelonia mydas Cmyd_10010791 I 0.364
Myotis_brandtii_HOXD4_10035001 Myotis brandtii Myotis_brandtii_HOXD4_10035001 I 0.364
Ogr14613 Ophisaurus gracilis Ogr14613 I 0.364
Pvit_11709 Pogona vitticeps Pvit_11709 I 0.364
Tal_R008970 Tyto alba Tal_R008970 I 0.364
Gfo_R001383 Geospiza fortis Gfo_R001383 I 0.364
ENSP00000407978-D3 Bos grunniens ENSP00000407978-D3 I 0.364
Afo_R006934 Aptenodytes forsteri Afo_R006934 I 0.364
Brh_R006731 Buceros rhinoceros Brh_R006731 I 0.364
ENSPFOG00000014015 Poecilia formosa ENSPFOG00000014015 I 0.364
ENSMMUP00000030942 Macaca fascicularis ENSMMUP00000030942 I 0.364
Aan_R004558 Calypte anna Aan_R004558 I 0.364
ENSPANG00000000542 Papio anubis ENSPANG00000000542 I 0.364
ENSDORG00000009442 Dipodomys ordii ENSDORG00000009442 I 0.364
HOXD4 Dasypus novemcinctus ENSDNOG00000019805 I 0.364
hoxd4a Danio rerio ENSDARG00000059276 I 0.364
HOXD4 Echinops telfairi ENSETEG00000019404 I 0.364
ENSFALG00000003181 Ficedula albicollis ENSFALG00000003181 I 0.364
HOXD4 Gallus gallus ENSGALG00000023419 I 0.364
ENSGACG00000004551 Gasterosteus aculeatus ENSGACG00000004551 I 0.364
HOXD4 Homo sapiens ENSG00000170166 D 0.364
ENSCSAG00000014429 Chlorocebus sabaeus ENSCSAG00000014429 I 0.364
ENSCPOG00000005501 Cavia porcellus ENSCPOG00000005501 I 0.364
ENSAMXG00000007015 Astyanax mexicanus ENSAMXG00000007015 I 0.364
ENSAMEG00000001837 Ailuropoda melanoleuca ENSAMEG00000001837 I 0.364
ENSACAG00000017905 Anolis carolinensis ENSACAG00000017905 I 0.364
ENSAPLG00000008983 Anas platyrhynchos ENSAPLG00000008983 I 0.364
HOXD4 Bos taurus ENSBTAG00000039581 I 0.364
HOXD4 Callithrix jacchus ENSCJAG00000008286 I 0.364
HOXD4 Choloepus hoffmanni ENSCHOG00000004176 I 0.364
HOXD4 Canis familiaris ENSCAFG00000013452 I 0.364
HOXD4 Gorilla gorilla ENSGGOG00000001345 I 0.364
ENSGMOG00000004261 Gadus morhua ENSGMOG00000004261 I 0.364
ENSOARG00000017483 Ovis aries ENSOARG00000017483 I 0.364
HOXD4 Ornithorhynchus anatinus ENSOANG00000008617 I 0.364
ENSNLEG00000006014 Nomascus leucogenys ENSNLEG00000006014 I 0.364
HOXD4 Oryctolagus cuniculus ENSOCUG00000002413 I 0.364
HOXD4 Otolemur garnettii ENSOGAG00000029168 I 0.364
ENSORLG00000017548 Oryzias latipes ENSORLG00000017548 I 0.364
ENSOPRG00000004081 Ochotona princeps ENSOPRG00000004081 I 0.364
ENSONIG00000008612 Oreochromis niloticus ENSONIG00000008612 I 0.364
Hoxd4 Mus musculus ENSMUSG00000101174 I 0.364
ENSMPUG00000014070 Mustela putorius furo ENSMPUG00000014070 I 0.364
ENSLOCG00000007074 Lepisosteus oculatus ENSLOCG00000007074 I 0.364
HOXD4 Loxodonta africana ENSLAFG00000005480 I 0.364
ENSLACG00000008693 Latimeria chalumnae ENSLACG00000008693 I 0.364
ENSMEUG00000016575 Macropus eugenii ENSMEUG00000016575 I 0.364
HOXD4 Microcebus murinus ENSMICG00000004283 I 0.364
HOXD4 Monodelphis domestica ENSMODG00000009598 I 0.364
ENSMMUG00000023506 Macaca mulatta ENSMMUG00000023506 I 0.364
HOXD4 Myotis lucifugus ENSMLUG00000012508 I 0.364
HOXD4 Procavia capensis ENSPCAG00000015781 I 0.364