Brh_R002799 (Buceros rhinoceros)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Brh_R002799 T225308_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.867 0.964
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.830 0.875
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.818 0.875
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.818 0.875
Hlx
M00485_2.00
Mus musculus
NNNAWND

HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.733 0.714
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA

THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.732 0.714
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA

THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.732 0.714
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN

NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.732 0.714
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R002799 Homeodomain 27 82

Links

Other Homeodomain family TFs
Other Buceros rhinoceros TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
18263_YNL167C Saccharomyces mikatae 18263_YNL167C I 0.000
18716_YNL167C Saccharomyces paradoxus 18716_YNL167C I 0.000
20254_YNL167C Saccharomyces bayanus 20254_YNL167C I 0.000
AACERI_AaceriAFR025C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR025C I 0.000
AGOS_AFR025C Ashbya gossypii AGOS_AFR025C I 0.000
CAGL0J06182g Candida glabrata CAGL0J06182g I 0.000
Ecym_6410 Eremothecium cymbalariae Ecym_6410 I 0.000
KAFR_0A07440 Kazachstania africana KAFR_0A07440 I 0.000
KLLA0_D08030g Kluyveromyces lactis KLLA0_D08030g I 0.000
KLTH0B06732g Lachancea thermotolerans KLTH0B06732g I 0.000
KLTH0B06732g Kluyveromyces thermotolerans KLTH0B06732g I 0.000
KNAG_0F01370 Kazachstania naganishii KNAG_0F01370 I 0.000
LALA0_S12e03994g Lachancea lanzarotensis LALA0_S12e03994g I 0.000
NCAS_0G02000 Naumovozyma castellii NCAS_0G02000 I 0.000
NDAI_0F03270 Naumovozyma dairenensis NDAI_0F03270 I 0.000
SAKL0E12562g Lachancea kluyveri SAKL0E12562g I 0.000
Scas_Contig654.5 Saccharomyces castellii Scas_Contig654.5 I 0.000
SKO1 Saccharomyces cerevisiae YNL167C D 0.000
SKUD_195304 Saccharomyces kudriavzevii SKUD_195304 I 0.000
TBLA_0D00190 Tetrapisispora blattae TBLA_0D00190 I 0.000
TDEL_0F00740 Torulaspora delbrueckii TDEL_0F00740 I 0.000
TPHA_0O01540 Tetrapisispora phaffii TPHA_0O01540 I 0.000
ZBAI_00974 Zygosaccharomyces bailii ZBAI_00974 I 0.000
ZBAI_06263 Zygosaccharomyces bailii ZBAI_06263 I 0.000
ZYRO0G05016g Zygosaccharomyces rouxii ZYRO0G05016g I 0.000