Brh_R006808 (Buceros rhinoceros)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Brh_R006808 T225338_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxa1
M00450_2.00
Mus musculus
NHRATKRNN

NNYMATYDN
PBM
Berger et al.(2008)
Hoxa1_3425
0.796 0.878
HOXA1
M03096_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
HOXA1_1
0.796 0.878
HOXA1
M04959_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX
0.796 0.878
HOXA1
M09133_2.00
Homo sapiens
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C
0.796 0.878
Hoxa1
M09196_2.00
Mus musculus
NKGATGGATG

CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C
0.796 0.878
HOXA1
M04960_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1
0.796 0.878
HOXA1
M04961_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2
0.796 0.878
lab
M03797_2.00
Drosophila melanogaster
NTAATTAS

STAATTAN
SELEX
Nitta et al.(2015)
lab_1
0.767 0.796
lab
M06493_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0230.1
0.767 0.796
lab
M06260_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522
0.767 0.796
lab
M06261_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522
0.767 0.796
HOXB1
M05057_2.00
Homo sapiens
NTAATTAS

STAATTAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_HT-SELEX
0.742 0.776
HOXB1
M05058_2.00
Homo sapiens
GTAATBAN

NTVATTAC
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_1
0.742 0.776
HOXB1
M05059_2.00
Homo sapiens
NTRAYGMB

VKCRTYAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_2
0.742 0.776
O76842_CUPSA
M02199_2.00
Cupiennius salei
TTAATTAB

VTAATTAA
PBM
Weirauch et al.(2014)
pTH6251
0.740 0.796
Hoxd1
M00492_2.00
Mus musculus
NRATNDNN

NNHNATYN
PBM
Berger et al.(2008)
Hoxd1_3448
0.723 0.776
Hoxd1
M10768_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD1_03
0.723 0.776
HOXD1
M05098_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_HT-SELEX
0.722 0.755
HOXD1
M05099_2.00
Homo sapiens
BTAATKAV

BTMATTAV
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_1
0.722 0.755
HOXD1
M05100_2.00
Homo sapiens
NTWAYGAB

VTCRTWAN
SELEX
Yin et al.(2017)
HOXD1_eDBD_Methyl-HT-SELEX_2
0.722 0.755
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.711 0.633
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.711 0.633
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.711 0.633
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.711 0.633
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.711 0.633
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.708 0.592
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.707 0.571
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.707 0.571
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.707 0.571
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.707 0.571
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.707 0.571
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.707 0.571
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.707 0.571
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.707 0.571
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.707 0.571
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.707 0.571
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.707 0.571
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.707 0.571
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.707 0.571
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.707 0.571
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.707 0.571
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.707 0.571
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.707 0.571
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.707 0.571
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.707 0.571
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.703 0.592
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.703 0.592
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.703 0.592
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.703 0.592
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.703 0.592
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.703 0.592
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.703 0.592
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.703 0.653
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.703 0.612
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.703 0.612
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.703 0.612
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.703 0.612
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.703 0.612
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.698 0.571
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.698 0.571
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.698 0.571
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.698 0.571
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.698 0.571
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN

NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.692 0.592
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH

DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.692 0.592
MNX1
M05126_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.692 0.592
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB

VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.692 0.592
MNX1
M05128_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.692 0.592
exex
M03871_2.00
Drosophila melanogaster
NNNNYAATTNNYDN

NHRNNAATTRNNNN
SELEX
Nitta et al.(2015)
exex_1
0.680 0.612
exex
M06544_2.00
Drosophila melanogaster
BTAATTA

TAATTAV
B1H
Mathelier et al.(2014)
MA0224.1
0.680 0.612
exex
M06364_2.00
Drosophila melanogaster
TAATTAV

BTAATTA
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
0.680 0.612
exex
M06365_2.00
Drosophila melanogaster
TAATBR

YVATTA
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
0.680 0.612
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN

NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.680 0.510
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN

NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.680 0.510
BSX
M03235_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.680 0.510
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.680 0.510
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR

YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.680 0.510
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN

NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.680 0.510
BSX
M05377_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.680 0.510
BSX
M05378_2.00
Homo sapiens
BTAATBRV

BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.680 0.510
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR

YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.680 0.510
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV

BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.680 0.510
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR

YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.680 0.510
BSX
M05379_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.680 0.510
BSX
M05380_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.680 0.510
pb
M03872_2.00
Drosophila melanogaster
NTRAYKRY

RYMRTYAN
SELEX
Nitta et al.(2015)
pb_1
0.680 0.633
pb
M06545_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0238.1
0.680 0.633
pb
M06366_2.00
Drosophila melanogaster
BYTAATKA

TMATTARV
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
0.680 0.633
pb
M06367_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
0.680 0.633
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG

CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.670 0.592
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK

MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.670 0.592
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN

NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.668 0.612
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.668 0.612
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.668 0.612
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.668 0.612
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.668 0.612
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.668 0.612
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.668 0.612
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.668 0.612
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB

VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.668 0.612
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN

NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.668 0.612
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.668 0.612
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB

VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.668 0.612
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.668 0.612
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.668 0.612
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.668 0.612
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB

VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.666 0.571
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN

NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.666 0.571
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.666 0.571
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN

NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.666 0.571
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.666 0.571
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.666 0.571
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB

VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.666 0.551
Barx1
M00413_2.00
Mus musculus
NNTAAYBDNN

NNHVRTTANN
PBM
Berger et al.(2008)
Barx1_2877
0.661 0.510
Barx2
M00457_2.00
Mus musculus
NTAABNDNN

NNHNVTTAN
PBM
Berger et al.(2008)
Barx2_3447
0.661 0.510
barx1
M02107_2.00
Tetraodon nigroviridis
NTAAYNNNN

NNNNRTTAN
PBM
Weirauch et al.(2014)
pTH6449
0.661 0.510
BARX1
M03144_2.00
Homo sapiens
TAATBGNWWWTTAATBR

YVATTAAWWWNCVATTA
SELEX
Jolma et al.(2013)
BARX1_1
0.661 0.510
BARX1
M03145_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BARX1_2
0.661 0.510
BARX2
M04915_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX
0.661 0.510
Barx1
M09181_2.00
Mus musculus
NNWAAKKGYTWH

DWARCMMTTWNN
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
0.661 0.510
BARX2
M04916_2.00
Homo sapiens
NTAAYKRTTWWN

NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX
0.661 0.510
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.658 0.592
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.658 0.592
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.658 0.592
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.658 0.592
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.658 0.592
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.658 0.571
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.658 0.571
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.658 0.571
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.658 0.571
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.658 0.571
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.658 0.571
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.658 0.571
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.658 0.571
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.658 0.571
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.658 0.571
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.658 0.571
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.658 0.571
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.658 0.571
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.658 0.571
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.658 0.571
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.658 0.571
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.658 0.571
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.658 0.571
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.658 0.571
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.658 0.571
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.658 0.571
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB

VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.658 0.571
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.658 0.571
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.658 0.571
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.658 0.571
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.658 0.571
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.658 0.571
Meox1
M00384_2.00
Mus musculus
NTRATKRNN

NNYMATYAN
PBM
Berger et al.(2008)
Meox1_2310
0.658 0.510
ventx3.2
M02232_2.00
Xenopus tropicalis
ATTAATTA

TAATTAAT
PBM
Weirauch et al.(2014)
pTH6291
0.658 0.510
MEOX1
M03077_2.00
Homo sapiens
NNTAATTASN

NSTAATTANN
SELEX
Jolma et al.(2013)
MEOX1_1
0.658 0.510
MEOX1
M04901_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1
0.658 0.510
MEOX1
M04902_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2
0.658 0.510
MEOX1
M04903_2.00
Homo sapiens
NTAAYGWB

VWCRTTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1
0.658 0.510
MEOX1
M04904_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2
0.658 0.510
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN

NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.658 0.469
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN

NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.658 0.469
Q9BJW6_9CNID
M02215_2.00
Sarsia sp. Long Island Sound
NBTAATTAVN

NBTAATTAVN
PBM
Weirauch et al.(2014)
pTH6287
0.658 0.469
btn
M03832_2.00
Drosophila melanogaster
NNTAATKANB

VNTMATTANN
SELEX
Nitta et al.(2015)
btn_1
0.658 0.469
btn
M03833_2.00
Drosophila melanogaster
VNTAATKABN

NVTMATTANB
SELEX
Nitta et al.(2015)
btn_2
0.658 0.469
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN

NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.658 0.469
eve
M06486_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.658 0.469
btn
M06515_2.00
Drosophila melanogaster
DTAATKA

TMATTAH
B1H
Mathelier et al.(2014)
MA0215.1
0.658 0.469
btn
M06307_2.00
Drosophila melanogaster
NDTAATKA

TMATTAHN
B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949
0.658 0.469
btn
M06308_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949
0.658 0.469
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA

TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.658 0.469
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY

RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.658 0.469
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.658 0.469
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD

HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.658 0.469
eve
M10786_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.658 0.469
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.654 0.551
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.654 0.551
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.654 0.551
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY

RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.654 0.551
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.654 0.551
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.654 0.551
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.654 0.551
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.654 0.551
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.654 0.551
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS

SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.654 0.551
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN

NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.654 0.551
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.654 0.551
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.654 0.551
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.654 0.551
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB

VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.654 0.551
ind
M06527_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.638 0.571
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA

TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.638 0.571
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.635 0.469
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.634 0.531
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.634 0.531
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.634 0.531
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN

NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.634 0.531
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.634 0.531
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.634 0.531
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.634 0.531
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.634 0.531
Nanog
M02098_2.00
Mus musculus
NHDAYNDNN

NNHNRTHDN
PBM
Weirauch et al.(2014)
pTH5685
0.632 0.429
Nanog
M09176_2.00
Mus musculus
HTYWRMAWNWSAAWRVV

BBYWTTSWNWTKYWRAD
Misc
Kulakovskiy et al.(2013)
NANOG_MOUSE.H11MO.0.A
0.632 0.429
Nanog
M09565_2.00
Mus musculus
BYTRATKGSY

RSCMATYARV
Misc
Heinz et al.(2010)
mES-Nanog_GSE11724
0.632 0.429
NANOG
M05015_2.00
Homo sapiens
NYRABBVB

VBVVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_HT-SELEX
0.632 0.408
NANOG
M09139_2.00
Homo sapiens
NTYWRCATNWSAAWRVN

NBYWTTSWNATGYWRAN
Misc
Kulakovskiy et al.(2013)
NANOG_HUMAN.H11MO.0.A
0.632 0.408
NANOG
M10664_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_01
0.632 0.408
NANOG
M10665_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_02
0.632 0.408
NANOG
M10666_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_05
0.632 0.408
NANOG
M10667_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_07
0.632 0.408
NANOG
M10668_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q3
0.632 0.408
NANOG
M10669_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q6
0.632 0.408
NANOG
M05016_2.00
Homo sapiens
NHAAYGH

DCRTTDN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_1
0.632 0.408
NANOG
M05017_2.00
Homo sapiens
NYRABKRN

NYMVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_2
0.632 0.408
ventx1.2.S
M10805_2.00
Xenopus laevis
RSRMAAATWBBVS

SBBBWATTTKYSY
Transfac
Matys et al.(2006)
V$XVENT1_01
0.627 0.490
ventx1.1.L
M02234_2.00
Xenopus laevis
NNNNVBNNNN

NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH6162
0.625 0.469
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.622 0.551
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.622 0.551
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.622 0.551
GSX1
M05271_2.00
Homo sapiens
NYMATNRN

NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.622 0.551
GSX2
M05329_2.00
Homo sapiens
HTAATKRS

SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.622 0.551
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.622 0.551
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.622 0.551
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.620 0.531
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.620 0.531
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.620 0.531
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.620 0.531
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.620 0.531
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.620 0.531
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.620 0.531
unpg
M03836_2.00
Drosophila melanogaster
SSTAATYRVN

NBYRATTASS
SELEX
Nitta et al.(2015)
unpg_1
0.617 0.571
unpg
M06517_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Mathelier et al.(2014)
MA0251.1
0.617 0.571
unpg
M06311_2.00
Drosophila melanogaster
NBTAATTR

YAATTAVN
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
0.617 0.571
unpg
M06312_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
0.617 0.571
VENTX
M00303_2.00
Homo sapiens
NVTAATTANNN

NNNTAATTABN
PBM
Barrera et al.(2016)
VENTX_E101K
0.617 0.469
VENTX
M02091_2.00
Homo sapiens
TTAATTAB

VTAATTAA
PBM
Weirauch et al.(2014)
pTH5490
0.617 0.449
VENTX
M00305_2.00
Homo sapiens
DTAATTRR

YYAATTAH
PBM
Barrera et al.(2016)
VENTX_REF
0.617 0.449
VENTX
M03169_2.00
Homo sapiens
YTAATBGNT

ANCVATTAR
SELEX
Jolma et al.(2013)
VENTX_1
0.617 0.449
VENTX
M03170_2.00
Homo sapiens
VSYTAATSGRWAAMCGATTAG

CTAATCGKTTWYCSATTARSB
SELEX
Jolma et al.(2013)
VENTX_2
0.617 0.449
VENTX
M05188_2.00
Homo sapiens
CGHTAATBG

CVATTADCG
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1
0.617 0.449
VENTX
M05189_2.00
Homo sapiens
VNTAATBRNN

NNYVATTANB
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2
0.617 0.449
VENTX
M05190_2.00
Homo sapiens
VHTAATKRNN

NNYMATTADB
SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX
0.617 0.449
VENTX
M00304_2.00
Homo sapiens
NATAYATAB

VTATRTATN
PBM
Barrera et al.(2016)
VENTX_R143C
0.617 0.429
Msx3
M00429_2.00
Mus musculus
TAATKDNN

NNHMATTA
PBM
Berger et al.(2008)
Msx3_3206
0.616 0.571
Msx3
M03255_2.00
Mus musculus
TAATTGSHHNNTAATTRN

NYAATTANNDDSCAATTA
SELEX
Jolma et al.(2013)
Msx3_1
0.616 0.571
Msx3
M03256_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Msx3_2
0.616 0.571
Dr
M00555_2.00
Drosophila melanogaster
TAATTRNN

NNYAATTA
PBM
Busser et al.(2012a)
Msh
0.615 0.571
Dr
M06482_2.00
Drosophila melanogaster
TAATTGS

SCAATTA
B1H
Mathelier et al.(2014)
MA0188.1
0.615 0.571
Dr
M06229_2.00
Drosophila melanogaster
TAATTGSHB

VDSCAATTA
B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492
0.615 0.571
Dr
M06230_2.00
Drosophila melanogaster
TAATTR

YAATTA
B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492
0.615 0.571
MSX2
M00290_2.00
Homo sapiens
WDATNDNN

NNHNATHW
PBM
Barrera et al.(2016)
MSX2_REF
0.615 0.551
Msx2
M00414_2.00
Mus musculus
HRATKRNN

NNYMATYD
PBM
Berger et al.(2008)
Msx2_3449
0.615 0.551
Msx1
M00501_2.00
Mus musculus
NHDATND

HNATHDN
PBM
Berger et al.(2008)
Msx1_3031
0.615 0.551
MSX1
M03184_2.00
Homo sapiens
TAATTRBHHNHTAATTRN

NYAATTADNDDVYAATTA
SELEX
Jolma et al.(2013)
MSX1_1
0.615 0.551
MSX1
M03185_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_2
0.615 0.551
MSX1
M03186_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_3
0.615 0.551
MSX2
M03127_2.00
Homo sapiens
TAATTRBHWKWTAATTGV

BCAATTAWMWDVYAATTA
SELEX
Jolma et al.(2013)
MSX2_1
0.615 0.551
MSX2
M03128_2.00
Homo sapiens
NTAATTGB

VCAATTAN
SELEX
Jolma et al.(2013)
MSX2_2
0.615 0.551
MSX1
M05221_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX
0.615 0.551
MSX1
M05224_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX
0.615 0.551
MSX2
M05060_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX
0.615 0.551
MSX1
M10715_2.00
Homo sapiens
HNBTWWNTG

CANWWAVND
Transfac
Matys et al.(2006)
V$MSX1_01
0.615 0.551
MSX1
M10716_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5_01
0.615 0.551
MSX1
M10717_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5
0.615 0.551
MSX2
M10677_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q3
0.615 0.551
MSX2
M10678_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q6
0.615 0.551
MSX2
M00288_2.00
Homo sapiens
NTAATNDN

NHNATTAN
PBM
Barrera et al.(2016)
MSX2_P148H
0.615 0.551
MSX2
M00289_2.00
Homo sapiens
WDATWDNN

NNHWATHW
PBM
Barrera et al.(2016)
MSX2_R172H
0.615 0.551
MSX1
M05222_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1
0.615 0.551
MSX1
M05223_2.00
Homo sapiens
NTWAYGMB

VKCRTWAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2
0.615 0.551
MSX1
M05225_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1
0.615 0.551
MSX1
M05226_2.00
Homo sapiens
NTWAYGWB

VWCRTWAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2
0.615 0.551
MSX2
M05061_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1
0.615 0.551
MSX2
M05062_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2
0.615 0.551
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.614 0.510
Dlx2
M00423_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Dlx2_2273
0.613 0.449
Dll
M02112_2.00
Drosophila melanogaster
NVTAATTANN

NNTAATTABN
PBM
Weirauch et al.(2014)
pTH5506
0.613 0.449
DLX2
M03118_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
DLX2_1
0.613 0.449
Dlx2
M03254_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Dlx2_1
0.613 0.449
Dll
M03777_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Dll_1
0.613 0.449
Dll
M03778_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Dll_2
0.613 0.449
DLX2
M05026_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_HT-SELEX
0.613 0.449
DLX2
M05028_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_HT-SELEX
0.613 0.449
Dll
M06479_2.00
Drosophila melanogaster
TAATTDB

VHAATTA
B1H
Mathelier et al.(2014)
MA0187.1
0.613 0.449
Dll
M06217_2.00
Drosophila melanogaster
TAATTDB

VHAATTA
B1H
Zhu et al.(2011)
Dll_Cell_FBgn0000157
0.613 0.449
Dll
M06218_2.00
Drosophila melanogaster
TAATKR

YMATTA
B1H
Zhu et al.(2011)
Dll_SOLEXA_FBgn0000157
0.613 0.449
DLX2
M10674_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX2_Q6
0.613 0.449
DLX2
M05027_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_Methyl-HT-SELEX
0.613 0.449
DLX2
M05029_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_Methyl-HT-SELEX
0.613 0.449
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN

NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.613 0.490
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV

BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.613 0.490
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN

NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.613 0.490
Meox2
M03271_2.00
Mus musculus
NTAATKAN

NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.613 0.490
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.613 0.490
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV

BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.613 0.490
Meox2
M10771_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.613 0.490
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.613 0.490
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN

NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.613 0.490
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.613 0.469
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.613 0.469
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.613 0.469
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.613 0.469
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.613 0.469
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.613 0.469
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.613 0.469
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.613 0.469
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.613 0.469
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.613 0.469
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.613 0.469
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.613 0.469
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.613 0.469
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.613 0.469
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK

MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.613 0.408
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.612 0.490
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.612 0.490
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.612 0.490
En2
M00484_2.00
Mus musculus
NNYHATHN

NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.611 0.490
En1
M00519_2.00
Mus musculus
HNWTNNN

NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.611 0.490
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB

VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.611 0.490
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA

TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.611 0.490
EN1
M03182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.611 0.490
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA

TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.611 0.490
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.611 0.490
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN

NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.611 0.490
En2
M03276_2.00
Mus musculus
VBTAATTASN

NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.611 0.490
en
M03793_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.611 0.490
EN1
M05218_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.611 0.490
EN2
M05237_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.611 0.490
EN1
M05871_2.00
Homo sapiens
VNYAATTA

TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.611 0.490
en
M06485_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.611 0.490
en
M06236_2.00
Drosophila melanogaster
NYTAATTR

YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.611 0.490
en
M06237_2.00
Drosophila melanogaster
DBTAATKR

YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.611 0.490
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN

NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.611 0.490
en
M06239_2.00
Drosophila melanogaster
NTAATTR

YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.611 0.490
en
M09677_2.00
Drosophila melanogaster
HTAATTRN

NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.611 0.490
en
M10785_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.611 0.490
EN1
M10714_2.00
Homo sapiens
RTDDTBB

VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.611 0.490
EN1
M05219_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.611 0.490
EN1
M05220_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.611 0.490
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB

VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.611 0.490
EN2
M05239_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.611 0.490
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.611 0.469
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.611 0.469
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.611 0.469
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.611 0.469
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.611 0.490
Gbx2
M00462_2.00
Mus musculus
NNDAHNN

NNDTHNN
PBM
Berger et al.(2008)
Gbx2_3110
0.605 0.571
Gbx1
M00525_2.00
Mus musculus
NNTAATNR

YNATTANN
PBM
Berger et al.(2008)
Gbx1_2883
0.605 0.571
GBX1
M03193_2.00
Homo sapiens
NBTAATTRSB

VSYAATTAVN
SELEX
Jolma et al.(2013)
GBX1_1
0.605 0.571
GBX2
M03201_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_1
0.605 0.571
GBX2
M03202_2.00
Homo sapiens
TAATTRVBCAATWA

TWATTGVBYAATTA
SELEX
Jolma et al.(2013)
GBX2_2
0.605 0.571
GBX2
M03203_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_3
0.605 0.571
Gbx1
M03286_2.00
Mus musculus
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx1_1
0.605 0.571
Gbx2
M03268_2.00
Mus musculus
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx2_1
0.605 0.571
GBX2
M05265_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX
0.605 0.571
GBX2
M05268_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX
0.605 0.571
GBX2
M05266_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1
0.605 0.571
GBX2
M05267_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2
0.605 0.571
GBX2
M05269_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1
0.605 0.571
GBX2
M05270_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2
0.605 0.571
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN

NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.603 0.571
Dlx5
M00449_2.00
Mus musculus
WRATNDN

NHNATYW
PBM
Berger et al.(2008)
Dlx5_3419
0.603 0.429
Dlx1
M00491_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Dlx1_1741
0.603 0.429
DLX1
M03166_2.00
Homo sapiens
NNTAATTDNN

NNHAATTANN
SELEX
Jolma et al.(2013)
DLX1_1
0.603 0.429
DLX5
M03095_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
DLX5_1
0.603 0.429
DLX6
M03078_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
DLX6_1
0.603 0.429
Dlx1
M03281_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Dlx1_1
0.603 0.429
DLX1
M05176_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_HT-SELEX
0.603 0.429
DLX1
M05178_2.00
Homo sapiens
NTAATTRB

VYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_HT-SELEX
0.603 0.429
DLX5
M04953_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_HT-SELEX
0.603 0.429
DLX5
M04956_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_HT-SELEX
0.603 0.429
DLX6
M04905_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_HT-SELEX
0.603 0.429
Dlx5
M09195_2.00
Mus musculus
WAATTRYWKBB

VVMWRYAATTW
Misc
Kulakovskiy et al.(2013)
DLX5_MOUSE.H11MO.0.C
0.603 0.429
DLX5
M10650_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX5_Q3
0.603 0.429
DLX1
M05177_2.00
Homo sapiens
NTAATTRB

VYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_Methyl-HT-SELEX
0.603 0.429
DLX1
M05179_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_Methyl-HT-SELEX
0.603 0.429
DLX5
M04954_2.00
Homo sapiens
NTAAYDAB

VTHRTTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_1
0.603 0.429
DLX5
M04955_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_2
0.603 0.429
DLX5
M04957_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_1
0.603 0.429
DLX5
M04958_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_2
0.603 0.429
DLX6
M04906_2.00
Homo sapiens
NTAAYKAB

VTMRTTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_1
0.603 0.429
DLX6
M04907_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_2
0.603 0.429
Dlx3
M00387_2.00
Mus musculus
NTAATDRNN

NNYHATTAN
PBM
Berger et al.(2008)
Dlx3_1030
0.601 0.429
DLX3
M03081_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
DLX3_1
0.601 0.429
DLX3
M04922_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX3_eDBD_HT-SELEX
0.601 0.429
DLX3
M04925_2.00
Homo sapiens
NTAATTRB

VYAATTAN
SELEX
Yin et al.(2017)
DLX3_FL_HT-SELEX
0.601 0.429
DLX3
M09129_2.00
Homo sapiens
RVTAATTRVH

DBYAATTABY
Misc
Kulakovskiy et al.(2013)
DLX3_HUMAN.H11MO.0.C
0.601 0.429
Dlx3
M09172_2.00
Mus musculus
RVTAATTRVH

DBYAATTABY
Misc
Kulakovskiy et al.(2013)
DLX3_MOUSE.H11MO.0.C
0.601 0.429
dlx3.L
M10803_2.00
Xenopus laevis Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_02
0.601 0.429
DLX3
M10638_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_Q3
0.601 0.429
DLX3
M10639_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX3_Q6
0.601 0.429
dlx3.L
M10804_2.00
Xenopus laevis
YAWRTAAAYAWWRY

RYWWTRTTTAYWWR
Transfac
Matys et al.(2006)
V$XFD1_01
0.601 0.429
DLX3
M04923_2.00
Homo sapiens
NTWAYKHB

VDMRTWAN
SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_1
0.601 0.429
DLX3
M04924_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_2
0.601 0.429
DLX3
M04926_2.00
Homo sapiens
NTWAYGHB

VDCRTWAN
SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_1
0.601 0.429
DLX3
M04927_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_2
0.601 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R006808 Homeodomain 16 64

Links

Other Homeodomain family TFs
Other Buceros rhinoceros TFs

4328 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R003424 Aptenodytes forsteri Afo_R003424 I 0.828
ENSOANG00000009163 Ornithorhynchus anatinus ENSOANG00000009163 I 0.828
Aan_R001084 Calypte anna Aan_R001084 I 0.828
ENSTGUG00000002898 Taeniopygia guttata ENSTGUG00000002898 I 0.828
HOXA1 Monodelphis domestica ENSMODG00000000507 I 0.828
Gfo_R015844 Geospiza fortis Gfo_R015844 I 0.828
Alligator_sinensis_CCG010195.1 Alligator sinensis Alligator_sinensis_CCG010195.1 I 0.828
ENSMEUG00000012576 Macropus eugenii ENSMEUG00000012576 I 0.828
HOXA1 Anolis carolinensis ENSACAG00000010967 I 0.828
ENSSHAG00000016818 Sarcophilus harrisii ENSSHAG00000016818 I 0.828
HOXA1 Gallus gallus ENSGALG00000028095 I 0.828
hoxa1a Danio rerio ENSDARG00000104307 I 0.828
ENSPSIG00000002734 Pelodiscus sinensis ENSPSIG00000002734 I 0.828
Pvit_02714 Pogona vitticeps Pvit_02714 I 0.828
ENSFALG00000009490 Ficedula albicollis ENSFALG00000009490 I 0.828
Ogr16309 Ophisaurus gracilis Ogr16309 I 0.828
hoxa1a Takifugu rubripes ENSTRUG00000015937 I 0.816
ENSAMXG00000005258 Astyanax mexicanus ENSAMXG00000005258 I 0.816
ENSLACG00000017232 Latimeria chalumnae ENSLACG00000017232 I 0.816
ENSGMOG00000013820 Gadus morhua ENSGMOG00000013820 I 0.816
ENSLOCG00000011798 Lepisosteus oculatus ENSLOCG00000011798 I 0.816
hoxa1a Oryzias latipes ENSORLG00000004981 I 0.816
ENSONIG00000004591 Oreochromis niloticus ENSONIG00000004591 I 0.816
hoxa1a Gasterosteus aculeatus ENSGACG00000007085 I 0.816
hoxa1a Tetraodon nigroviridis ENSTNIG00000000977 I 0.816
ENSPFOG00000002670 Poecilia formosa ENSPFOG00000002670 I 0.816
tetur11g05940 Tetranychus urticae tetur11g05940 I 0.809
hoxa1 Xenopus tropicalis XB-GENE-480737 I 0.808
hoxa1.L Xenopus laevis XB-GENE-480741 I 0.808
DAPPUDRAFT_347216 Daphnia pulex DAPPUDRAFT_347216 I 0.808
hoxa1.S Xenopus laevis XB-GENE-6252179 I 0.808
ENSLACG00000008144 Latimeria chalumnae ENSLACG00000008144 I 0.806
HOXB1 Gallus gallus ENSGALG00000013454 I 0.806
hoxb1 Xenopus tropicalis XB-GENE-485772 I 0.806
Aan_R012461 Calypte anna Aan_R012461 I 0.806
ENSAPLG00000013693 Anas platyrhynchos ENSAPLG00000013693 I 0.806
Afo_R006600 Aptenodytes forsteri Afo_R006600 I 0.806
Alligator_sinensis_CCG014467.1 Alligator sinensis Alligator_sinensis_CCG014467.1