Brh_R013532 (Buceros rhinoceros)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Brh_R013532 T225388_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Meis2
M00437_2.00
Mus musculus
NTGACANNN

NNNTGTCAN
PBM
Berger et al.(2008)
Mrg1_2246
0.447 1.000
MEIS2
M03147_2.00
Homo sapiens
WTGACAGSTGTCAM

KTGACASCTGTCAW
SELEX
Jolma et al.(2013)
MEIS2_1
0.447 1.000
MEIS2
M03148_2.00
Homo sapiens
DTGACAGS

SCTGTCAH
SELEX
Jolma et al.(2013)
MEIS2_2
0.447 1.000
Meis2
M03261_2.00
Mus musculus
NTGACAN

NTGTCAN
SELEX
Jolma et al.(2013)
Meis2_1
0.447 1.000
Meis2
M03262_2.00
Mus musculus
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis2_2
0.447 1.000
MEIS2
M02740_2.00
Homo sapiens
TGACASSTGTC

GACASSTGTCA
SELEX
Jolma et al.(2010)
MEIS2_dimer
0.447 1.000
MEIS2
M02741_2.00
Homo sapiens
GGACAKNT

ANMTGTCC
SELEX
Jolma et al.(2010)
MEIS2_monomer
0.447 1.000
MEIS2
M05138_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX
0.447 1.000
MEIS2
M05140_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX
0.447 1.000
MEIS2
M09143_2.00
Homo sapiens
HTGACAGBTKTBM

KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B
0.447 1.000
Meis2
M09189_2.00
Mus musculus
HTGACAGBTKTBM

KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B
0.447 1.000
MEIS2
M05139_2.00
Homo sapiens
YGACASSYGHCR

YGDCRSSTGTCR
SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX
0.447 1.000
MEIS2
M05141_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX
0.447 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R013532 Homeodomain 61 110

Links

Other Homeodomain family TFs
Other Buceros rhinoceros TFs

Invalid Input OrderBy

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action