CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Cflo_12078--XP_001122113.1_APIME
(
Camponotus floridanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cflo_12078--XP_001122113.1_APIME
T225558_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN
NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.430
1.000
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH
DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.430
1.000
MNX1
M05126_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.430
1.000
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB
VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.430
1.000
MNX1
M05128_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.430
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_12078--XP_001122113.1_APIME
Homeodomain
1
20
MLTETQVKIWFQNRRMKWKR
Links
Other
Homeodomain
family TFs
Other
Camponotus floridanus
TFs
863 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy