Cmyd_10005403 (Chelonia mydas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cmyd_10005403 T225674_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Barx2
M00457_2.00 		Mus musculus
NTAABNDNN
NNHNVTTAN		 PBM
Berger et al.(2008)
Barx2_3447 		0.497 1.000
BARX2
M04915_2.00 		Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN		 SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX 		0.497 1.000
BARX2
M04916_2.00 		Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN		 SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX 		0.497 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005403 Homeodomain 1 45

Links

Other Homeodomain family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

746 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action