Cmyd_10006628 (Chelonia mydas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cmyd_10006628 T225681_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
acj6
M02241_2.00
Drosophila melanogaster
VTMATTAA

TTAATKAB
PBM
Weirauch et al.(2014)
pTH6053
0.857 0.982
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN

NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
0.646 0.491
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10006628 Homeodomain 35 91

Links

Other Homeodomain family TFs
Other Chelonia mydas TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cflo_05860--XP_394134.2_APIME Camponotus floridanus Cflo_05860--XP_394134.2_APIME I 0.857
acj6 Drosophila melanogaster FBgn0000028 D 0.857
L798_02028 Zootermopsis nevadensis L798_02028 I 0.857
L898_g18190 Steinernema monticolum L898_g18190 I 0.852
Ogr05710 Ophisaurus gracilis Ogr05710 I 0.831
PPAI004106 Phlebotomus papatasi PPAI004106 I 0.793
AMAM021613 Anopheles maculatus AMAM021613 I 0.793
ENSOANG00000013329 Ornithorhynchus anatinus ENSOANG00000013329 I 0.743
BXY_0883500 Bursaphelenchus xylophilus BXY_0883500 I 0.719
HelroG138303 Helobdella robusta HelroG138303 I 0.714
ENSCING00000013609 Ciona intestinalis ENSCING00000013609 I 0.674
DAPPUDRAFT_9350 Daphnia pulex DAPPUDRAFT_9350 I 0.664
POU2F2 Homo sapiens ENSG00000028277 D 0.663
ENSSHAG00000018562 Sarcophilus harrisii ENSSHAG00000018562 I 0.663
AMAM009961 Anopheles maculatus AMAM009961 I 0.663
ENSCSAVG00000007148 Ciona savignyi ENSCSAVG00000007148 I 0.660
SBAD_0000673901 Soboliphyme baturini SBAD_0000673901 I 0.652
L596_g13343 Steinernema carpocapsae L596_g13343 I 0.649
GPUH_0000951201 Gongylonema pulchrum GPUH_0000951201 I 0.648
BGIBMGA010300 Bombyx mori BGIBMGA010300 I 0.642
MESCA009897 Megaselia scalaris MESCA009897 I 0.637
EFV49290 Trichinella spiralis EFV49290 I 0.635
POU5F1 Callithrix jacchus ENSCJAG00000019789 I 0.624