Cmyd_10016939 (Chelonia mydas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cmyd_10016939 T225773_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pha-2
M02184_2.00
Caenorhabditis elegans
NNNATNDNNN

NNNHNATNNN
PBM
Weirauch et al.(2014)
pTH6423
0.708 0.772
HHEX
M06541_2.00
Drosophila melanogaster
WYBAATWA

TWATTVRW
B1H
Mathelier et al.(2014)
MA0183.1
0.683 0.667
HHEX
M06358_2.00
Drosophila melanogaster
WYBAATWA

TWATTVRW
B1H
Zhu et al.(2011)
CG7056_Cell_FBgn0038852
0.683 0.667
HHEX
M06359_2.00
Drosophila melanogaster
NYBAATWR

YWATTVRN
B1H
Zhu et al.(2011)
CG7056_SOLEXA_FBgn0038852
0.683 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10016939 Homeodomain 148 204

Links

Other Homeodomain family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action