TF Information

Cmyd_10017119 *(Chelonia mydas)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	Cmyd_10017119	T225780_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
VAX1 M03168_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX1_1	0.745	0.267
VAX1 M05182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) VAX1_eDBD_HT-SELEX	0.745	0.267
VAX1 M05183_2.00	Homo sapiens	BTMATKRN	NYMATKAV	SELEX Yin et al.(2017) VAX1_eDBD_Methyl-HT-SELEX	0.745	0.267
VSX1 M03087_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX1_1	0.739	0.378
VSX1 M03088_2.00	Homo sapiens	NNYAATTRRBN	NVYYAATTRNN	SELEX Jolma et al.(2013) VSX1_2	0.739	0.378
VSX1 M04941_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) VSX1_eDBD_HT-SELEX	0.739	0.378
VSX1 M04944_2.00	Homo sapiens	NTAATTRS	SYAATTAN	SELEX Yin et al.(2017) VSX1_FL_HT-SELEX	0.739	0.378
VSX1 M05869_2.00	Homo sapiens	DGCTAATTAN	NTAATTAGCH	SMiLE-seq Isakova et al.(2017) VSX1	0.739	0.378
VSX1 M04942_2.00	Homo sapiens	NTAAYGMN	NKCRTTAN	SELEX Yin et al.(2017) VSX1_eDBD_Methyl-HT-SELEX_1	0.739	0.378
VSX1 M04943_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) VSX1_eDBD_Methyl-HT-SELEX_2	0.739	0.378
VSX1 M04945_2.00	Homo sapiens	NTAATTRG	CYAATTAN	SELEX Yin et al.(2017) VSX1_FL_Methyl-HT-SELEX_1	0.739	0.378
VSX1 M04946_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) VSX1_FL_Methyl-HT-SELEX_2	0.739	0.378
LHX2 M02085_2.00	Homo sapiens	NNNYAAHDDN	NHHDTTRNNN	PBM Weirauch et al.(2014) pTH5812	0.360	1.000
Lhx2 M00380_2.00	Mus musculus	NTAATKRN	NYMATTAN	PBM Berger et al.(2008) Lhx2_0953	0.360	1.000
Lhx9 M00406_2.00	Mus musculus	NTAATDRN	NYHATTAN	PBM Berger et al.(2008) Lhx9_3492	0.360	1.000
LHX2 M03106_2.00	Homo sapiens	NNTAATTAGN	NCTAATTANN	SELEX Jolma et al.(2013) LHX2_1	0.360	1.000
LHX2 M03107_2.00	Homo sapiens	YAATTANVCTAATTR	YAATTAGBNTAATTR	SELEX Jolma et al.(2013) LHX2_2	0.360	1.000
LHX9 M03163_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) LHX9_1	0.360	1.000
LHX9 M03164_2.00	Homo sapiens	TAATTRGYMATTA	TAATKRCYAATTA	SELEX Jolma et al.(2013) LHX9_2	0.360	1.000
LHX9 M05170_2.00	Homo sapiens	YTAATTRG	CYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_HT-SELEX	0.360	1.000
LHX9 M05173_2.00	Homo sapiens	NTAATTRG	CYAATTAN	SELEX Yin et al.(2017) LHX9_FL_HT-SELEX	0.360	1.000
LHX2 M09136_2.00	Homo sapiens	NBYTAATTRVNB	VNBYAATTARVN	Misc Kulakovskiy et al.(2013) LHX2_HUMAN.H11MO.0.A	0.360	1.000
Lhx2 M09169_2.00	Mus musculus	NNTAATKRGN	NCYMATTANN	Misc Kulakovskiy et al.(2013) LHX2_MOUSE.H11MO.0.A	0.360	1.000
Lhx2 M09562_2.00	Mus musculus	NYTAATTA	TAATTARN	Misc Heinz et al.(2010) HFSC-Lhx2_GSE48068	0.360	1.000
LHX2 M10655_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q4	0.360	1.000
LHX2 M10656_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX2_Q6	0.360	1.000
LHX9 M05171_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_1	0.360	1.000
LHX9 M05172_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_eDBD_Methyl-HT-SELEX_2	0.360	1.000
LHX9 M05174_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_1	0.360	1.000
LHX9 M05175_2.00	Homo sapiens	HTAACGAB	VTCGTTAD	SELEX Yin et al.(2017) LHX9_FL_Methyl-HT-SELEX_2	0.360	1.000
For this family, TFs with SR scores > 0.599* will likely have a similar motif*