CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMMUP00000017877
(
Macaca fascicularis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ENSMMUP00000017877
T225914_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RHOXF1
M03089_2.00
Homo sapiens
RGATNAKCY
RGMTNATCY
SELEX
Jolma et al.(2013)
RHOXF1_1
0.685
0.895
RHOXF1
M03090_2.00
Homo sapiens
NTRAKCCN
NGGMTYAN
SELEX
Jolma et al.(2013)
RHOXF1_2
0.685
0.895
RHOXF1
M03091_2.00
Homo sapiens
VGMTHAKCC
GGMTDAKCB
SELEX
Jolma et al.(2013)
RHOXF1_3
0.685
0.895
RHOXF1
M03092_2.00
Homo sapiens
NTRAKCCH
DGGMTYAN
SELEX
Jolma et al.(2013)
RHOXF1_4
0.685
0.895
RHOXF1
M04947_2.00
Homo sapiens
NTRATCCN
NGGATYAN
SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX
0.685
0.895
RHOXF1
M04948_2.00
Homo sapiens
NTRATCCN
NGGATYAN
SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX
0.685
0.895
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000017877
Homeodomain
103
159
RIRRKKFTPLQVQELESVFQRTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCRR
Links
Other
Homeodomain
family TFs
Other
Macaca fascicularis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy