Gfo_R001743 (Geospiza fortis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gfo_R001743 T226161_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R001743 Homeodomain 151 195

Links

Other Homeodomain family TFs
Other Geospiza fortis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10018206 Chelonia mydas Cmyd_10018206 N 0.867
Brh_R009091 Buceros rhinoceros Brh_R009091 N 0.833
Afo_R004424 Aptenodytes forsteri Afo_R004424 N 0.833
Tal_R010537 Tyto alba Tal_R010537 N 0.833
Brh_R009090 Buceros rhinoceros Brh_R009090 N 0.827
Gfo_R001742 Geospiza fortis Gfo_R001742 N 0.827
Tal_R010536 Tyto alba Tal_R010536 N 0.827
Afo_R004423 Aptenodytes forsteri Afo_R004423 N 0.827
Cmyd_10006636 Chelonia mydas Cmyd_10006636 N 0.801
Myotis_brandtii_SLC6A7_10034750 Myotis brandtii Myotis_brandtii_SLC6A7_10034750 I 0.797
Ogr00063 Ophisaurus gracilis Ogr00063 I 0.786
SPU_019656 Strongylocentrotus purpuratus SPU_019656 N 0.786
ENSGMOG00000004079 Gadus morhua ENSGMOG00000004079 N 0.781
ENSLOCG00000004278 Lepisosteus oculatus ENSLOCG00000004278 N 0.718
Hba_18080 Heterorhabditis bacteriophora Hba_18080 N 0.676
D915_09728 Fasciola hepatica D915_09728 N 0.673
ISCW011755 Ixodes scapularis ISCW011755 N 0.668
ACYPI007360 Acyrthosiphon pisum ACYPI007360 N 0.667
scro Drosophila melanogaster FBgn0028993 D 0.667
HNAJ_0000742201 Hymenolepis nana HNAJ_0000742201 N 0.664
NECAME_06897 Necator americanus NECAME_06897 N 0.662
Ogr05812 Ophisaurus gracilis Ogr05812 N 0.662
CLEC007188 Cimex lectularius CLEC007188 N 0.662
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.662
MCOS_0000074401 Mesocestoides corti MCOS_0000074401 N 0.662
ASTEI04298 Anopheles stephensi ASTEI04298 N 0.662
ANCCEY_11186 Ancylostoma ceylanicum ANCCEY_11186 N 0.662
SINV24463 Solenopsis invicta SINV24463 N 0.662
ACEP14712 Atta cephalotes ACEP14712 N 0.662
AALB003620 Anopheles albimanus AALB003620 N 0.662
DILT_0001226501 Diphyllobothrium latum DILT_0001226501 I 0.661
SSLN_0001021301 Schistocephalus solidus SSLN_0001021301 I 0.661
Sjc_0057900 Schistosoma japonicum Sjc_0057900 N 0.661
Ppa-ceh-28 Pristionchus pacificus PPA19627 N 0.655
scaffold28-EXSNAP2012.55 Pristionchus exspectatus scaffold28-EXSNAP2012.55 N 0.655
MhA1_Contig1149.frz3.gene7 Meloidogyne hapla MhA1_Contig1149.frz3.gene7 N 0.652
DILT_0000246201 Diphyllobothrium latum DILT_0000246201 N 0.650
SPER_0003017401 Spirometra erinaceieuropaei SPER_0003017401 N 0.650
SPER_0002786601 Spirometra erinaceieuropaei SPER_0002786601 N 0.650
ACYPI061631 Acyrthosiphon pisum ACYPI061631 N 0.649
CBG11788 Caenorhabditis briggsae CBG11788 N 0.647
GPUH_0000280301 Gongylonema pulchrum GPUH_0000280301 N 0.646
HmN_000683200 Hymenolepis microstoma HmN_000683200 N 0.646
CBG27683 Caenorhabditis briggsae CBG27683 N 0.646
L892_g18619 Steinernema scapterisci L892_g18619 N 0.644
BGIBMGA000762 Bombyx mori BGIBMGA000762 N 0.644
ANCDUO_22746 Ancylostoma duodenale ANCDUO_22746 N 0.644
AMEM018396 Anopheles merus AMEM018396 N 0.644
AFAF019448 Anopheles farauti AFAF019448 N 0.644
AATE015248 Anopheles atroparvus AATE015248 N 0.644
Hsal_00498--XP_394578.2_APIME Harpegnathos saltator Hsal_00498--XP_394578.2_APIME N 0.644
CGOC_0001416801 Cylicostephanus goldi CGOC_0001416801 N 0.644
D918_02763 Trichuris suis D918_02763 N 0.644
PXEA_0000454701 Protopolystoma xenopodis PXEA_0000454701 N 0.643
F775_52178 Aegilops tauschii F775_52178 N 0.643
ENSECAG00000023678 Equus caballus ENSECAG00000023678 I 0.642
CGI_10013606 Crassostrea gigas CGI_10013606 N 0.637
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.637
nkx2-4 Xenopus tropicalis XB-GENE-487481 I 0.636
Ocbimv22011232m.g Octopus bimaculoides Ocbimv22011232m.g N 0.630
AMAM017394 Anopheles maculatus AMAM017394 N 0.628
PXEA_0002847001 Protopolystoma xenopodis PXEA_0002847001 N 0.626
estExt_fgenesh1_pg.C_70088 Phytophthora capsici estExt_fgenesh1_pg.C_70088 N 0.616
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.613
nRc.2.0.1.g41491 Romanomermis culicivorax nRc.2.0.1.g41491 N 0.604