Gfo_R005354 (Geospiza fortis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gfo_R005354 T226183_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN

NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.672 0.460
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005354 Homeodomain 2 54

Links

Other Homeodomain family TFs
Other Geospiza fortis TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003869 Calypte anna Aan_R003869 I 0.754
Aan_R015659 Calypte anna Aan_R015659 I 0.858
AB04741.1 Alternaria brassicicola AB04741.1 I 0.638
Afo_R009272 Aptenodytes forsteri Afo_R009272 I 0.737
Afo_R011092 Aptenodytes forsteri Afo_R011092 I 0.861
Alligator_sinensis_CCG010381.1 Alligator sinensis Alligator_sinensis_CCG010381.1 I 0.737
Aqu1.225495 Amphimedon queenslandica Aqu1.225495 I 0.741
ATEG_05203 Aspergillus terreus CADATEAG00005116 I 0.650
A_07284 Schistosoma haematobium A_07284 I 0.781
Brh_R000015 Buceros rhinoceros Brh_R000015 I 0.795
Brh_R010356 Buceros rhinoceros Brh_R010356 I 0.737
CapteG100741 Capitella teleta CapteG100741 I 0.680
CapteG49895 Capitella teleta CapteG49895 I 0.692
CapteG70907 Capitella teleta CapteG70907 I 0.600
CapteG88319 Capitella teleta CapteG88319 I 0.692
CBG25749 Caenorhabditis briggsae CBG25749 I 0.635
CCM_02544 Cordyceps militaris CCM_02544 I 0.630
CGI_10011802 Crassostrea gigas CGI_10011802 I 0.717
COCC4DRAFT_49159 Bipolaris maydis COCC4DRAFT_49159 I 0.638
COCCADRAFT_44321 Bipolaris zeicola COCCADRAFT_44321 I 0.638
COCMIDRAFT_53102 Bipolaris oryzae COCMIDRAFT_53102 I 0.638
COCSADRAFT_107886 Bipolaris sorokiniana COCSADRAFT_107886 I 0.630
COCVIDRAFT_49416 Bipolaris victoriae COCVIDRAFT_49416 I 0.638
D915_00592 Fasciola hepatica D915_00592 I 0.771
D915_04768 Fasciola hepatica D915_04768 I 0.771
D915_05481 Fasciola hepatica D915_05481 I 0.850
DICVIV_07073 Dictyocaulus viviparus DICVIV_07073 N 0.614
DILT_0000254701 Diphyllobothrium latum DILT_0000254701 I 0.723
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.614
ECPE_0000388901 Echinostoma caproni ECPE_0000388901 I 0.771
ENSAMXG00000000335 Astyanax mexicanus ENSAMXG00000000335 I 0.853
ENSAPLG00000010674 Anas platyrhynchos ENSAPLG00000010674 I 0.717
ENSCAFG00000010422 Canis familiaris ENSCAFG00000010422 I 0.742
ENSCSAG00000011743 Chlorocebus sabaeus ENSCSAG00000011743 I 0.737
ENSLACG00000017763 Latimeria chalumnae ENSLACG00000017763 I 0.608
ENSLOCG00000006946 Lepisosteus oculatus ENSLOCG00000006946 I 0.702
ENSMEUG00000004557 Macropus eugenii ENSMEUG00000004557 I 0.771
ENSMEUG00000014864 Macropus eugenii ENSMEUG00000014864 I 0.681
ENSMPUG00000007638 Mustela putorius furo ENSMPUG00000007638 I 0.742
ENSOANG00000029378 Ornithorhynchus anatinus ENSOANG00000029378 I 0.742
ENSOARG00000016067 Ovis aries ENSOARG00000016067 I 0.737
ENSONIG00000016567 Oreochromis niloticus ENSONIG00000016567 I 0.690
ENSONIG00000018672 Oreochromis niloticus ENSONIG00000018672 I 0.737
ENSPFOG00000006638 Poecilia formosa ENSPFOG00000006638 I 0.829
ENSPFOG00000013469 Poecilia formosa ENSPFOG00000013469 I 0.737
ENSPTRG00000039451 Pan troglodytes ENSPTRG00000039451 I 0.602
ENSSSCG00000009724 Sus scrofa ENSSSCG00000009724 I 0.604
ENSTNIG00000000637 Tetraodon nigroviridis ENSTNIG00000000637 I 0.690
ENSXMAG00000006967 Xiphophorus maculatus ENSXMAG00000006967 I 0.737
ENSXMAG00000012663 Xiphophorus maculatus ENSXMAG00000012663 I 0.829
estExt_fgenesh2_pg.C_2210037 Branchiostoma floridae estExt_fgenesh2_pg.C_2210037 I 0.737
estExt_Genewise1.C_110663 Cochliobolus heterostrophus C5 estExt_Genewise1.C_110663 I 0.638
FFUJ_12565 Fusarium fujikuroi FFUJ_12565 I 0.625
FGRRES_07914 Fusarium graminearum FGRRES_07914 D 0.672
FGRRES_17555 Fusarium graminearum FGRRES_17555 I 0.630
FOXG_13545 Fusarium oxysporum FOXG_13545 I 0.625
Gfo_R014865 Geospiza fortis Gfo_R014865 I 0.737
HCOI01137300 Haemonchus contortus HCOI01137300 N 0.614
HDID_0000776001 Hymenolepis diminuta HDID_0000776001 I 0.682
HelroG138488 Helobdella robusta HelroG138488 I 0.742
HelroG153600 Helobdella robusta HelroG153600 I 0.746
HelroG153627 Helobdella robusta HelroG153627 I 0.600
HelroG171177 Helobdella robusta HelroG171177 I 0.681
HMEL002096 Heliconius melpomene HMEL002096 I 0.771
HmN_000921700 Hymenolepis microstoma HmN_000921700 I 0.741
HmN_000922600 Hymenolepis microstoma HmN_000922600 I 0.741
HNAJ_0001179801 Hymenolepis nana HNAJ_0001179801 I 0.741
irx1.L Xenopus laevis XB-GENE-865648 I 0.690
IRX3 Dasypus novemcinctus ENSDNOG00000012985 I 0.771
Irx3 Rattus norvegicus ENSRNOG00000011533 I 0.742
irx7 Gasterosteus aculeatus ENSGACG00000011160 I 0.842
irx7 Takifugu rubripes ENSTRUG00000007926 I 0.829
ISCW017111 Ixodes scapularis ISCW017111 I 0.737
L596_g21727 Steinernema carpocapsae L596_g21727 I 0.662
L892_g27282 Steinernema scapterisci L892_g27282 I 0.707
L893_g31416 Steinernema glaseri L893_g31416 I 0.689
L898_g17064 Steinernema monticolum L898_g17064 I 0.707
MCOS_0000604901 Mesocestoides corti MCOS_0000604901 N 0.603
MKX Procavia capensis ENSPCAG00000014719 I 0.742
MKX Tupaia belangeri ENSTBEG00000008150 I 0.737
mkxb Tetraodon nigroviridis ENSTNIG00000007881 I 0.737
mkxb Takifugu rubripes ENSTRUG00000004166 I 0.737
Myotis_brandtii_Irx1_10035798 Myotis brandtii Myotis_brandtii_Irx1_10035798 I 0.742
NBR_0001052001 Nippostrongylus brasiliensis NBR_0001052001 N 0.614
Ocbimv22006483m.g Octopus bimaculoides Ocbimv22006483m.g I 0.717
Ogr18478 Ophisaurus gracilis Ogr18478 I 0.742
PTT_11733 Pyrenophora teres PTT_11733 I 0.638
PXEA_0002454601 Protopolystoma xenopodis PXEA_0002454601 I 0.771
SCUD_0000714801 Schistosoma curassoni SCUD_0000714801 I 0.781
SETTUDRAFT_162538 Setosphaeria turcica SETTUDRAFT_162538 I 0.638
Sjc_0052220 Schistosoma japonicum Sjc_0052220 I 0.781
SMAR002833 Strigamia maritima SMAR002833 I 0.704
SMAR007687 Strigamia maritima SMAR007687 I 0.742
SMRZ_0000148301 Schistosoma margrebowiei SMRZ_0000148301 I 0.781
SMTD_0002243001 Schistosoma mattheei SMTD_0002243001 I 0.742
SMUV_0000063001 Syphacia muris SMUV_0000063001 I 0.765
SNAPOd2T00027338001 Oikopleura dioica SNAPOd2T00027338001 I 0.608
SNOG_06363 Phaeosphaeria nodorum SNOG_06363 I 0.663
SNOG_06363 Stagonospora nodorum SNOG_06363 I 0.663
SPER_0001325101 Spirometra erinaceieuropaei SPER_0001325101 I 0.779
SSLN_0000846501 Schistocephalus solidus SSLN_0000846501 I 0.779
Tal_R007088 Tyto alba Tal_R007088 I 0.737
TASK_0000658901 Taenia asiatica TASK_0000658901 I 0.743
TsM_000760900 Taenia solium TsM_000760900 I 0.743
TTAC_0000670801 Hydatigera taeniaeformis TTAC_0000670801 I 0.741
Z519_11142 Cladophialophora bantiana Z519_11142 I 0.679