CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_05386--XP_624630.2_APIME
(
Harpegnathos saltator
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Hsal_05386--XP_624630.2_APIME
T226273_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
al
M03776_2.00
Drosophila melanogaster
TAAYBNVRTTA
TAAYBNVRTTA
SELEX
Nitta et al.(2015)
al_1
0.447
1.000
al
M06477_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Mathelier et al.(2014)
MA0208.1
0.447
1.000
al
M06212_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061
0.447
1.000
al
M06213_2.00
Drosophila melanogaster
NNYTAATTR
YAATTARNN
B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061
0.447
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_05386--XP_624630.2_APIME
Homeodomain
1
23
MKIGLTEARIQVWFQNRRAKWRK
Links
Other
Homeodomain
family TFs
Other
Harpegnathos saltator
TFs
863 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy