Myotis_brandtii_HMBOX1_10012332 (Myotis brandtii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Myotis_brandtii_HMBOX1_10012332 T226350_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.867 1.000
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.867 1.000
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.867 1.000
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.867 1.000
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.638 0.368
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.638 0.368
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.638 0.368
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.638 0.368
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.638 0.368
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.638 0.368
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.638 0.368
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.638 0.368
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.638 0.368
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.638 0.368
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.638 0.368
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.638 0.368
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.638 0.368
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.638 0.368
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.638 0.368
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.638 0.368
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.638 0.368
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_HMBOX1_10012332 Homeodomain 181 252

Links

Other Homeodomain family TFs
Other Myotis brandtii TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMAM018190 Anopheles maculatus AMAM018190 I 0.000
BATDEDRAFT_26501 Batrachochytrium dendrobatidis BATDEDRAFT_26501 N 0.000
BGIBMGA008456 Bombyx mori BGIBMGA008456 I 0.000
Brh_R008378 Buceros rhinoceros Brh_R008378 I 0.000
ARX Callithrix jacchus ENSCJAG00000004737 N 0.000
CapteG194920 Capitella teleta CapteG194920 N 0.000
W97_03305 Coniosporium apollinis W97_03305 N 0.000
ECPE_0000850801 Echinostoma caproni ECPE_0000850801 N 0.000
EMIHUDRAFT_458874 Emiliania huxleyi EMIHUDRAFT_458874 N 0.000
CMQ_3213 Grosmannia clavigera CMQ_3213 N 0.000
HPBE_0002330201 Heligmosomoides bakeri HPBE_0002330201 N 0.000
MELLADRAFT_76073 Melampsora laricipopulina MELLADRAFT_76073 N 0.000
Ogr05500 Ophisaurus gracilis Ogr05500 N 0.000
ENSPSIG00000017365 Pelodiscus sinensis ENSPSIG00000017365 N 0.000
PredSwiss_EST630.2 Pneumocystis carinii PredSwiss_EST630.2 N 0.000
RPRC010976 Rhodnius prolixus RPRC010976 I 0.000
SSLN_0000633001 Schistocephalus solidus SSLN_0000633001 N 0.000
SCLCIDRAFT_1213522 Scleroderma citrinum SCLCIDRAFT_1213522 N 0.000
M408DRAFT_6277 Serendipita vermifera M408DRAFT_6277 N 0.000
SPER_0003632001 Spirometra erinaceieuropaei SPER_0003632001 N 0.000
SPER_0003833401 Spirometra erinaceieuropaei SPER_0003833401 N 0.000
SPBR_00949 Sporothrix brasiliensis SPBR_00949 N 0.000
TCNE_0000266601 Toxocara canis TCNE_0000266601 N 0.000
TCNE_0000939301 Toxocara canis TCNE_0000939301 N 0.000
TRE_0000179101 Trichobilharzia regenti TRE_0000179101 N 0.000
TRIATDRAFT_297397 Trichoderma atroviride TRIATDRAFT_297397 N 0.000