CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_Irx1_10035798
(
Myotis brandtii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Myotis_brandtii_Irx1_10035798
T226388_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.606
0.423
Irx4
M00416_2.00
Mus musculus
NNNDAMAH
DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.485
1.000
Irx2
M00386_2.00
Mus musculus
NNDACAHNN
NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.454
1.000
Irx3
M00453_2.00
Mus musculus
NNDACAHNNN
NNNDTGTHNN
PBM
Berger et al.(2008)
Irx3_0920
0.454
1.000
Irx3
M00454_2.00
Mus musculus
NNDACWHN
NDWGTHNN
PBM
Berger et al.(2008)
Irx3_2226
0.454
1.000
Irx5
M00455_2.00
Mus musculus
NNNDACAHN
NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.454
1.000
Irx6
M00456_2.00
Mus musculus
NNDAHWN
NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.454
1.000
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.454
1.000
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.454
1.000
Irx3
M03266_2.00
Mus musculus
WWTKTCATGTWR
YWACATGAMAWW
SELEX
Jolma et al.(2013)
Irx3_1
0.454
1.000
IRX1
M05283_2.00
Homo sapiens
DDCRHNNNNNNNNDYGHH
DDCRHNNNNNNNNDYGHH
SELEX
Yin et al.(2017)
IRX1_eDBD_HT-SELEX
0.454
1.000
IRX3
M05319_2.00
Homo sapiens
DACAHGNWWWWNCDTGTH
DACAHGNWWWWNCDTGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_HT-SELEX
0.454
1.000
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.454
1.000
mirr
M06514_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0233.1
0.454
1.000
ara
M06518_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.454
1.000
caup
M06519_2.00
Drosophila melanogaster
WAACA
TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.454
1.000
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN
NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.454
1.000
ara
M06314_2.00
Drosophila melanogaster
DWWACA
TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.454
1.000
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA
TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.454
1.000
caup
M06316_2.00
Drosophila melanogaster
NDDACA
TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.454
1.000
mirr
M06305_2.00
Drosophila melanogaster
NDNWWACA
TGTWWNHN
B1H
Zhu et al.(2011)
Mirr_Cell_FBgn0014343
0.454
1.000
mirr
M06306_2.00
Drosophila melanogaster
DDWACA
TGTWHH
B1H
Zhu et al.(2011)
Mirr_SOLEXA_FBgn0014343
0.454
1.000
IRX1
M05284_2.00
Homo sapiens
NNCRHNNNNNNNNDYVHN
NDBRHNNNNNNNNDYGNN
SELEX
Yin et al.(2017)
IRX1_eDBD_Methyl-HT-SELEX
0.454
1.000
IRX3
M05320_2.00
Homo sapiens
DACRYRHNWWNDYKCGTW
WACGMRHNWWNDYRYGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_Methyl-HT-SELEX
0.454
1.000
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.454
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_Irx1_10035798
Homeodomain
1
26
MLAIITKMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Myotis brandtii
TFs
555 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy