Myotis_brandtii_TGIF1_10019916 (Myotis brandtii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Myotis_brandtii_TGIF1_10019916 T226451_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tgif1
M00500_2.00
Mus musculus
NNTGACANNN

NNNTGTCANN
PBM
Berger et al.(2008)
Tgif1_2342
0.867 1.000
TGIF1
M03223_2.00
Homo sapiens
TGACAGCTGTCA

TGACAGCTGTCA
SELEX
Jolma et al.(2013)
TGIF1_1
0.867 1.000
TGIF1
M05317_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_HT-SELEX
0.867 1.000
TGIF1
M09159_2.00
Homo sapiens
TGACAGS

SCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_HUMAN.H11MO.0.A
0.867 1.000
Tgif1
M09211_2.00
Mus musculus
TGACAGBNV

BNVCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_MOUSE.H11MO.0.A
0.867 1.000
TGIF1
M10740_2.00
Homo sapiens
WHNTGACARST

ASYTGTCANDW
Transfac
Matys et al.(2006)
V$TGIF_01
0.867 1.000
TGIF1
M05318_2.00
Homo sapiens
TGACAKVTGTCA

TGACABMTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_Methyl-HT-SELEX
0.867 1.000
Tgif2
M00521_2.00
Mus musculus
NNTGACANNN

NNNTGTCANN
PBM
Berger et al.(2008)
Tgif2_3451
0.809 0.836
TGIF2
M03123_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2_1
0.809 0.836
TGIF2
M05032_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_HT-SELEX
0.809 0.836
TGIF2
M05034_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_HT-SELEX
0.809 0.836
TGIF2
M05033_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_Methyl-HT-SELEX
0.809 0.836
TGIF2
M05035_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_Methyl-HT-SELEX
0.809 0.836
achi
M03860_2.00
Drosophila melanogaster
TGACAD

HTGTCA
SELEX
Nitta et al.(2015)
achi_1
0.767 0.727
achi
M03861_2.00
Drosophila melanogaster
TGACAGMTGTCA

TGACAKCTGTCA
SELEX
Nitta et al.(2015)
achi_2
0.767 0.727
achi
M03862_2.00
Drosophila melanogaster
TGACAGNNNNNNYGTCA

TGACRNNNNNNCTGTCA
SELEX
Nitta et al.(2015)
achi_3
0.767 0.727
vis
M03859_2.00
Drosophila melanogaster
TGACAS

STGTCA
SELEX
Nitta et al.(2015)
vis_1
0.767 0.727
vis
M06534_2.00
Drosophila melanogaster
TGACAB

BTGTCA
B1H
Mathelier et al.(2014)
MA0252.1
0.767 0.727
achi
M06535_2.00
Drosophila melanogaster
TGACAG

CTGTCA
B1H
Mathelier et al.(2014)
MA0207.1
0.767 0.727
achi
M06345_2.00
Drosophila melanogaster
TGTCADW

WHTGACA
B1H
Zhu et al.(2011)
Achi_Cell_FBgn0033749
0.767 0.727
achi
M06346_2.00
Drosophila melanogaster
HTGACA

TGTCAD
B1H
Zhu et al.(2011)
Achi_SOLEXA_FBgn0033749
0.767 0.727
vis
M06343_2.00
Drosophila melanogaster
TGTCA

TGACA
B1H
Zhu et al.(2011)
Vis_Cell_FBgn0033748
0.767 0.727
vis
M06344_2.00
Drosophila melanogaster
TGTCAD

HTGACA
B1H
Zhu et al.(2011)
Vis_SOLEXA_FBgn0033748
0.767 0.727
unc-62
M02185_2.00
Caenorhabditis elegans
NHDAHANNN

NNNTDTHDN
PBM
Weirauch et al.(2014)
pTH5781
0.652 0.509
Pknox2
M00468_2.00
Mus musculus
NNNGACRNNN

NNNYGTCNNN
PBM
Berger et al.(2008)
Pknox2_3077
0.631 0.527
PKNOX2
M03195_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
PKNOX2_1
0.631 0.527
Pknox2
M03270_2.00
Mus musculus
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
Pknox2_1
0.631 0.527
PKNOX2
M05246_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
PKNOX2_eDBD_HT-SELEX
0.631 0.527
PKNOX2
M05247_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
PKNOX2_eDBD_Methyl-HT-SELEX
0.631 0.527
Pknox1
M00399_2.00
Mus musculus
HGACRNNN

NNNYGTCD
PBM
Berger et al.(2008)
Pknox1_2364
0.631 0.509
PKNOX1
M03178_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
PKNOX1_1
0.631 0.509
PKNOX1
M05206_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
PKNOX1_eDBD_HT-SELEX
0.631 0.509
PKNOX1
M05208_2.00
Homo sapiens
TGACAGCTGTCA

TGACAGCTGTCA
SELEX
Yin et al.(2017)
PKNOX1_FL_HT-SELEX
0.631 0.509
PKNOX1
M09150_2.00
Homo sapiens
TGABTGRCRGV

BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PKNX1_HUMAN.H11MO.0.B
0.631 0.509
Pknox1
M09175_2.00
Mus musculus
TGABTGRCRGV

BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PKNX1_MOUSE.H11MO.0.A
0.631 0.509
PKNOX1
M10712_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PREP1_Q3
0.631 0.509
PKNOX1
M05207_2.00
Homo sapiens
YGWCASSTGWCR

YGWCASSTGWCR
SELEX
Yin et al.(2017)
PKNOX1_eDBD_Methyl-HT-SELEX
0.631 0.509
PKNOX1
M05209_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
PKNOX1_FL_Methyl-HT-SELEX
0.631 0.509
TGIF2LX
M03171_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2LX_1
0.628 0.673
TGIF2LX
M05191_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_HT-SELEX
0.628 0.673
TGIF2LX
M05193_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_HT-SELEX
0.628 0.673
TGIF2LX
M05192_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_Methyl-HT-SELEX
0.628 0.673
TGIF2LX
M05194_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_Methyl-HT-SELEX
0.628 0.673
TGIF2LY
M05313_2.00
Homo sapiens
TGACABVTGTCA

TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_HT-SELEX
0.628 0.655
TGIF2LY
M05314_2.00
Homo sapiens
YGACABVTGTCR

YGACABVTGTCR
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_Methyl-HT-SELEX
0.628 0.655
hth
M06490_2.00
Drosophila melanogaster
TGACAK

MTGTCA
B1H
Mathelier et al.(2014)
MA0227.1
0.624 0.545
hth
M06252_2.00
Drosophila melanogaster
TGTCA

TGACA
B1H
Zhu et al.(2011)
Hth_Cell_FBgn0001235
0.624 0.545
hth
M06253_2.00
Drosophila melanogaster
NNTGACAD

HTGTCANN
B1H
Zhu et al.(2011)
hth_SOLEXA_2_FBgn0001235
0.624 0.545
hth
M06254_2.00
Drosophila melanogaster
NTGACA

TGTCAN
B1H
Zhu et al.(2011)
Hth_SOLEXA_FBgn0001235
0.624 0.545
Meis1
M00407_2.00
Mus musculus
NTGACADNN

NNHTGTCAN
PBM
Berger et al.(2008)
Meis1_2335
0.624 0.527
Meis2
M00437_2.00
Mus musculus
NTGACANNN

NNNTGTCAN
PBM
Berger et al.(2008)
Mrg1_2246
0.624 0.527
Meis3
M00488_2.00
Mus musculus
NTGACANNN

NNNTGTCAN
PBM
Berger et al.(2008)
Mrg2_2302
0.624 0.527
MEIS1
M03165_2.00
Homo sapiens
NTGACAN

NTGTCAN
SELEX
Jolma et al.(2013)
MEIS1_1
0.624 0.527
MEIS2
M03147_2.00
Homo sapiens
WTGACAGSTGTCAM

KTGACASCTGTCAW
SELEX
Jolma et al.(2013)
MEIS2_1
0.624 0.527
MEIS2
M03148_2.00
Homo sapiens
DTGACAGS

SCTGTCAH
SELEX
Jolma et al.(2013)
MEIS2_2
0.624 0.527
Meis2
M03261_2.00
Mus musculus
NTGACAN

NTGTCAN
SELEX
Jolma et al.(2013)
Meis2_1
0.624 0.527
Meis2
M03262_2.00
Mus musculus
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis2_2
0.624 0.527
Meis3
M03279_2.00
Mus musculus
NTGACAN

NTGTCAN
SELEX
Jolma et al.(2013)
Meis3_1
0.624 0.527
Meis3
M03280_2.00
Mus musculus
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis3_2
0.624 0.527
MEIS2
M02740_2.00
Homo sapiens
TGACASSTGTC

GACASSTGTCA
SELEX
Jolma et al.(2010)
MEIS2_dimer
0.624 0.527
MEIS2
M02741_2.00
Homo sapiens
GGACAKNT

ANMTGTCC
SELEX
Jolma et al.(2010)
MEIS2_monomer
0.624 0.527
MEIS2
M05138_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX
0.624 0.527
MEIS2
M05140_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX
0.624 0.527
MEIS1
M09148_2.00
Homo sapiens
NTGATTDATDDB

VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_HUMAN.H11MO.0.A
0.624 0.527
MEIS2
M09143_2.00
Homo sapiens
HTGACAGBTKTBM

KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B
0.624 0.527
Meis1
M09178_2.00
Mus musculus
NTGATTDATDDB

VHHATHAATCAN
Misc
Kulakovskiy et al.(2013)
MEIS1_MOUSE.H11MO.0.A
0.624 0.527
Meis2
M09189_2.00
Mus musculus
HTGACAGBTKTBM

KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B
0.624 0.527
Meis1
M09568_2.00
Mus musculus
VBTGWCASNN

NNSTGWCAVB
Misc
Heinz et al.(2010)
MastCells-Meis1_GSE48085
0.624 0.527
MEIS1
M10709_2.00
Homo sapiens
NHNTGACAGNDN

NHNCTGTCANDN
Transfac
Matys et al.(2006)
V$MEIS1_01
0.624 0.527
MEIS1
M10710_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEIS1_06
0.624 0.527
MEIS2
M05139_2.00
Homo sapiens
YGACASSYGHCR

YGDCRSSTGTCR
SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX
0.624 0.527
MEIS2
M05141_2.00
Homo sapiens
TGACASSTGTCA

TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX
0.624 0.527
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_TGIF1_10019916 Homeodomain 97 154

Links

Other Homeodomain family TFs
Other Myotis brandtii TFs

Invalid Input OrderBy

796 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action