TF Information

Ogr11012 *(Ophisaurus gracilis)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	Ogr11012	T226537_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
VSX1 M03087_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX1_1	0.808	0.522
VSX1 M03088_2.00	Homo sapiens	NNYAATTRRBN	NVYYAATTRNN	SELEX Jolma et al.(2013) VSX1_2	0.808	0.522
VSX1 M04941_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) VSX1_eDBD_HT-SELEX	0.808	0.522
VSX1 M04944_2.00	Homo sapiens	NTAATTRS	SYAATTAN	SELEX Yin et al.(2017) VSX1_FL_HT-SELEX	0.808	0.522
VSX1 M05869_2.00	Homo sapiens	DGCTAATTAN	NTAATTAGCH	SMiLE-seq Isakova et al.(2017) VSX1	0.808	0.522
VSX1 M04942_2.00	Homo sapiens	NTAAYGMN	NKCRTTAN	SELEX Yin et al.(2017) VSX1_eDBD_Methyl-HT-SELEX_1	0.808	0.522
VSX1 M04943_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) VSX1_eDBD_Methyl-HT-SELEX_2	0.808	0.522
VSX1 M04945_2.00	Homo sapiens	NTAATTRG	CYAATTAN	SELEX Yin et al.(2017) VSX1_FL_Methyl-HT-SELEX_1	0.808	0.522
VSX1 M04946_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) VSX1_FL_Methyl-HT-SELEX_2	0.808	0.522
VAX1 M03168_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX1_1	0.715	0.370
VAX1 M05182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) VAX1_eDBD_HT-SELEX	0.715	0.370
VAX1 M05183_2.00	Homo sapiens	BTMATKRN	NYMATKAV	SELEX Yin et al.(2017) VAX1_eDBD_Methyl-HT-SELEX	0.715	0.370
Otx1 M00396_2.00	Mus musculus	NTAAKCYN	NRGMTTAN	PBM Berger et al.(2008) Otx1_2325	0.377	1.000
OTX1 M03116_2.00	Homo sapiens	NNTAAKCGGATTANN	NNTAATCCGMTTANN	SELEX Jolma et al.(2013) OTX1_1	0.377	1.000
OTX1 M03117_2.00	Homo sapiens	NTAATCSB	VSGATTAN	SELEX Jolma et al.(2013) OTX1_2	0.377	1.000
Otx1 M03249_2.00	Mus musculus	NNTAAKCGGATTANN	NNTAATCCGMTTANN	SELEX Jolma et al.(2013) Otx1_1	0.377	1.000
Otx1 M03250_2.00	Mus musculus	NTAATCCN	NGGATTAN	SELEX Jolma et al.(2013) Otx1_2	0.377	1.000
OTX1 M05022_2.00	Homo sapiens	NTAATCCN	NGGATTAN	SELEX Yin et al.(2017) OTX1_eDBD_HT-SELEX	0.377	1.000
OTX1 M05024_2.00	Homo sapiens	NTAATCCNNN	NNNGGATTAN	SELEX Yin et al.(2017) OTX1_FL_HT-SELEX	0.377	1.000
OTX1 M10673_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$OTX1_Q5	0.377	1.000
OTX1 M05023_2.00	Homo sapiens	NTAATCCN	NGGATTAN	SELEX Yin et al.(2017) OTX1_eDBD_Methyl-HT-SELEX	0.377	1.000
OTX1 M05025_2.00	Homo sapiens	HTAATCCNHN	NDNGGATTAD	SELEX Yin et al.(2017) OTX1_FL_Methyl-HT-SELEX	0.377	1.000
For this family, TFs with SR scores > 0.599* will likely have a similar motif*