Pm022951 (Prunus mume)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pm022951 T226673_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WOX13
M02049_2.00
Arabidopsis thaliana
YTGATTGA

TCAATCAR
PBM
Weirauch et al.(2014)
pTH6461
0.861 0.860
WOX13
M00866_2.00
Arabidopsis thaliana
NNTGATTGAN

NTCAATCANN
PBM
Franco-Zorrilla et al.(2014)
WOX13
0.861 0.860
GRMZM2G038252
M02137_2.00
Zea mays
HTRATTGV

BCAATYAD
PBM
Weirauch et al.(2014)
pTH6141
0.848 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022951 Homeodomain 59 120

Links

Other Homeodomain family TFs
Other Prunus mume TFs

344 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_01503 Arthroderma benhamiae ARB_01503 N 0.000
CIMG_02826 Coccidioides immitis CIMG_02826 N 0.000
CPC735_036110 Coccidioides posadasii CPC735_036110 N 0.000
H101_05679 Trichophyton interdigitale H101_05679 N 0.000
H102_08898 Trichophyton rubrum H102_08898 N 0.000
H105_08925 Trichophyton soudanense H105_08925 N 0.000
MCYG_07105 Arthroderma otae MCYG_07105 N 0.000
MCYG_07105 Microsporum canis MCYG_07105 N 0.000
MGYG_03489 Microsporum gypseum MGYG_03489 N 0.000
PV10_02943 Exophiala mesophila PV10_02943 N 0.000
TEQG_06018 Trichophyton equinum TEQG_06018 N 0.000
TESG_05160 Trichophyton tonsurans TESG_05160 N 0.000
TRV_05591 Trichophyton verrucosum TRV_05591 N 0.000
VHEMI04558 Torrubiella hemipterigena VHEMI04558 N 0.000