Pm025458 (Prunus mume)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pm025458 T226680_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX11
M06916_2.00 		Arabidopsis thaliana
ADTTAATTAVD
HBTAATTAAHT		 Dap-seq
OMalley et al.(2016)
WOX11_col_a 		0.819 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm025458 Homeodomain 22 83

Links

Other Homeodomain family TFs
Other Prunus mume TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa026303mg Prunus persica PRUPE_ppa026303mg I 0.846
gene30337-v1.0-hybrid Fragaria vesca gene30337-v1.0-hybrid I 0.844
MDP0000524885 Malus domestica MDP0000524885 I 0.844
MDP0000136426 Malus domestica MDP0000136426 I 0.844
LjSGA_037808.1 Lotus japonicus LjSGA_037808.1 I 0.833
LjT26C04.20.nd Lotus japonicus LjT26C04.20.nd I 0.833
Traes_2BS_8A1FE01EE Triticum aestivum Traes_2BS_8A1FE01EE I 0.831
GSMUA_Achr6G15910_001 Musa acuminata GSMUA_Achr6G15910_001 I 0.831
LPERR03G13850 Leersia perrieri LPERR03G13850 I 0.831
MLOC_65745 Hordeum vulgare MLOC_65745 I 0.831
LPERR07G23470 Leersia perrieri LPERR07G23470 I 0.831
GSMUA_Achr10G12820_001 Musa acuminata GSMUA_Achr10G12820_001 I 0.831
OPUNC07G25100 Oryza punctata OPUNC07G25100 I 0.831
GRMZM2G162481 Zea mays GRMZM2G162481 I 0.831
POPTR_0019s05730 Populus trichocarpa POPTR_0019s05730 I 0.831
Pavir.Ba00249 Panicum virgatum Pavir.Ba00249 I 0.831
TCM_025805 Theobroma cacao TCM_025805 I 0.831
GLYMA19G29660 Glycine max GLYMA19G29660 I 0.831
POPTR_0013s06310 Populus trichocarpa POPTR_0013s06310 I 0.831
ORUFI07G27650 Oryza rufipogon ORUFI07G27650 I 0.831
Traes_2DS_B5227B5F6 Triticum aestivum Traes_2DS_B5227B5F6 I 0.831
Cucsa.336980 Cucumis sativus Cucsa.336980 I 0.831
Traes_4DL_5E79CC79C Triticum aestivum Traes_4DL_5E79CC79C I 0.831
OGLUM03G15990 Oryza glumaepatula OGLUM03G15990 I 0.831
OBART07G26670 Oryza barthii OBART07G26670 I 0.831
evm.TU.supercontig_73.3 Carica papaya evm.TU.supercontig_73.3 I 0.831
Eucgr.A02149 Eucalyptus grandis Eucgr.A02149 I 0.831
OGLUM07G26700 Oryza glumaepatula OGLUM07G26700 I 0.831
OMERI07G23310 Oryza meridionalis OMERI07G23310 I 0.831
Ciclev10021682m.g Citrus clementina Ciclev10021682m.g I 0.831
ONIVA07G26430 Oryza nivara ONIVA07G26430 I 0.831
OBART03G15820 Oryza barthii OBART03G15820 I 0.831
OS03G0325600 Oryza sativa OS03G0325600 I 0.831
MTR_6g027390 Medicago truncatula MTR_6g027390 I 0.831
Gorai.007G346300 Gossypium raimondii Gorai.007G346300 I 0.831
GLYMA03G01000 Glycine max GLYMA03G01000 I 0.831
MTR_7g086940 Medicago truncatula MTR_7g086940 I 0.831
Traes_4AS_EC04D9E8A Triticum aestivum Traes_4AS_EC04D9E8A I 0.831
WOX11 Oryza sativa OS07G0684900 I 0.831
OPUNC03G15320 Oryza punctata OPUNC03G15320 I 0.831
Gorai.013G196400 Gossypium raimondii Gorai.013G196400 I 0.831
orange1.1g047211m.g Citrus sinensis orange1.1g047211m.g I 0.831
30072.m000927 Ricinus communis 30072.m000927 I 0.831
Sb02g043300 Sorghum bicolor Sb02g043300 I 0.831
AMTR_s00119p00100440 Amborella trichopoda AMTR_s00119p00100440 I 0.831
Pavir.Ia03448 Panicum virgatum Pavir.Ia03448 I 0.831
mgf016673m Mimulus guttatus mgf016673m I 0.831
SapurV1A.0631s0110 Salix purpurea SapurV1A.0631s0110 I 0.831
Aquca_014_00949 Aquilegia coerulea Aquca_014_00949 I 0.831
Ca_19701 Cicer arietinum Ca_19701 I 0.831
cassava15562.m1 Manihot esculenta cassava15562.m1 I 0.831
Pavir.J23422 Panicum virgatum Pavir.J23422 I 0.831
Ca_08180 Cicer arietinum Ca_08180 I 0.831
Sb01g036670 Sorghum bicolor Sb01g036670 I 0.831
BRADI1G17420 Brachypodium distachyon BRADI1G17420 I 0.831
SapurV1A.1660s0010 Salix purpurea SapurV1A.1660s0010 I 0.831
ORGLA03G0151500 Oryza glaberrima ORGLA03G0151500 I 0.831
WOX6 Oryza indica BGIOSGA010824 I 0.831
ORUFI03G16410 Oryza rufipogon ORUFI03G16410 I 0.831
BGIOSGA026413 Oryza indica BGIOSGA026413 I 0.831
ORGLA07G0211000 Oryza glaberrima ORGLA07G0211000 I 0.831
Si030836m.g Setaria italica Si030836m.g I 0.831
Si039112m.g Setaria italica Si039112m.g I 0.831
F775_22811 Aegilops tauschii F775_22811 I 0.831
VIT_08s0056g01200 Vitis vinifera VIT_08s0056g01200 I 0.830
GSMUA_Achr9G05010_001 Musa acuminata GSMUA_Achr9G05010_001 I 0.823
GSMUA_Achr8G01590_001 Musa acuminata GSMUA_Achr8G01590_001 I 0.823
Bra031980 Brassica rapa Bra031980 I 0.820
Cagra.6254s0027 Capsella grandiflora Cagra.6254s0027 I 0.820
Bra036446 Brassica rapa Bra036446 I 0.820
Cagra.2098s0022 Capsella grandiflora Cagra.2098s0022 I 0.820
Carubv10003719m.g Capsella rubella Carubv10003719m.g I 0.820
Bo1g153650 Brassica oleracea Bo1g153650 I 0.820
Bostr.19046s0084 Boechera stricta Bostr.19046s0084 I 0.820
Bo5g148780 Brassica oleracea Bo5g148780 I 0.820
Thhalv10022222m.g Eutrema salsugineum Thhalv10022222m.g I 0.820
Thhalv10015651m.g Eutrema salsugineum Thhalv10015651m.g I 0.820
Carubv10016081m.g Capsella rubella Carubv10016081m.g I 0.820
WOX11 Arabidopsis lyrata fgenesh2_kg.3__312__AT3G03660.1 I 0.819
WOX11 Arabidopsis thaliana AT3G03660 D 0.819
Solyc06g072890.1 Solanum lycopersicum Solyc06g072890.1 I 0.818
PGSC0003DMG400027030 Solanum tuberosum PGSC0003DMG400027030 I 0.818
WOX12 Arabidopsis lyrata Al_scaffold_0006_1694 I 0.811
TRIUR3_34808 Triticum urartu TRIUR3_34808 I 0.811
Bra002108 Brassica rapa Bra002108 I 0.811
Bo9g159820 Brassica oleracea Bo9g159820 I 0.811
WOX12 Arabidopsis thaliana AT5G17810 I 0.811
ORUFI08G08400 Oryza rufipogon ORUFI08G08400 I 0.800
ONIVA08G08030 Oryza nivara ONIVA08G08030 I 0.800
ORGLA08G0063600 Oryza glaberrima ORGLA08G0063600 I 0.800
GRMZM2G314064 Zea mays GRMZM2G314064 I 0.800
Pavir.Fb01029 Panicum virgatum Pavir.Fb01029 I 0.800
BRADI3G18800 Brachypodium distachyon BRADI3G18800 I 0.800
Sb07g007600 Sorghum bicolor Sb07g007600 I 0.800
Si015065m.g Setaria italica Si015065m.g I 0.800
WOX10 Oryza indica BGIOSGA027391 I 0.800
F775_11947 Aegilops tauschii F775_11947 I 0.800
GRMZM2G170958 Zea mays GRMZM2G170958 I 0.800
TRAES3BF079200050CFD_g Triticum aestivum TRAES3BF079200050CFD_g I 0.800
WOX10 Oryza sativa OS08G0242400 I 0.800
MLOC_6669 Hordeum vulgare MLOC_6669 I 0.800
TRIUR3_34876 Triticum urartu TRIUR3_34876 I 0.800
OGLUM08G08120 Oryza glumaepatula OGLUM08G08120 I 0.800
LPERR07G23520 Leersia perrieri LPERR07G23520 I 0.799
GSMUA_Achr5G27730_001 Musa acuminata GSMUA_Achr5G27730_001 I 0.792
cassava4770.m1 Manihot esculenta cassava4770.m1 I 0.792
Pavir.J33010 Panicum virgatum Pavir.J33010 I 0.792
Bra023638 Brassica rapa Bra023638 I 0.788
Bo11772s010 Brassica oleracea Bo11772s010 I 0.788
GSMUA_Achr10G05090_001 Musa acuminata GSMUA_Achr10G05090_001 I 0.788
Bo2g013980 Brassica oleracea Bo2g013980 I 0.788
Bo2g062660 Brassica oleracea Bo2g062660 I 0.788
GSMUA_Achr3G09460_001 Musa acuminata GSMUA_Achr3G09460_001 I 0.786
OB08G17020 Oryza brachyantha OB08G17020 I 0.778
mgf017527m Mimulus guttatus mgf017527m I 0.773
Pavir.Ib01521 Panicum virgatum Pavir.Ib01521 I 0.747
OB10G14840 Oryza brachyantha OB10G14840 I 0.736
Si025013m.g Setaria italica Si025013m.g I 0.723
Sb09g028562 Sorghum bicolor Sb09g028562 I 0.723
Pavir.Ca00938 Panicum virgatum Pavir.Ca00938 I 0.723
GRMZM2G409881 Zea mays GRMZM2G409881 I 0.723
gene28935-v1.0-hybrid Fragaria vesca gene28935-v1.0-hybrid I 0.718
Bostr.8819s0128 Boechera stricta Bostr.8819s0128 I 0.710
Cagra.2097s0014 Capsella grandiflora Cagra.2097s0014 I 0.710
Bo2g127670 Brassica oleracea Bo2g127670 I 0.710
Bra022008 Brassica rapa Bra022008 I 0.710
Carubv10027735m.g Capsella rubella Carubv10027735m.g I 0.710
WOX8 Arabidopsis lyrata scaffold_800245.1 I 0.710
Cucsa.046640 Cucumis sativus Cucsa.046640 I 0.706
cassava4506.m1 Manihot esculenta cassava4506.m1 I 0.706
cassava40675.m1 Manihot esculenta cassava40675.m1 I 0.706
gene29786-v1.0-hybrid Fragaria vesca gene29786-v1.0-hybrid I 0.706
orange1.1g036145m.g Citrus sinensis orange1.1g036145m.g I 0.706
MDP0000729328 Malus domestica MDP0000729328 I 0.706
MDP0000232004 Malus domestica MDP0000232004 I 0.706
Pavir.Eb02702 Panicum virgatum Pavir.Eb02702 I 0.706
SapurV1A.0012s0880 Salix purpurea SapurV1A.0012s0880 I 0.706
CM1489.70.nc Lotus japonicus CM1489.70.nc I 0.706
Thhalv10016784m.g Eutrema salsugineum Thhalv10016784m.g I 0.706
SapurV1A.0270s0270 Salix purpurea SapurV1A.0270s0270 I 0.706
Lus10005282.g Linum usitatissimum Lus10005282.g I 0.706
Gorai.011G031300 Gossypium raimondii Gorai.011G031300 I 0.706
Cagra.1195s0012 Capsella grandiflora Cagra.1195s0012 I 0.706
Bostr.23794s0703 Boechera stricta Bostr.23794s0703 I 0.706
Aquca_036_00007 Aquilegia coerulea Aquca_036_00007 I 0.706
Carubv10025224m.g Capsella rubella Carubv10025224m.g I 0.706
Ciclev10015562m.g Citrus clementina Ciclev10015562m.g I 0.706
Gorai.009G165700 Gossypium raimondii Gorai.009G165700 I 0.706
29900.m001555 Ricinus communis 29900.m001555 I 0.706
evm.TU.supercontig_7.12 Carica papaya evm.TU.supercontig_7.12 I 0.706
mgf001579m Mimulus guttatus mgf001579m I 0.706
PGSC0003DMG400010725 Solanum tuberosum PGSC0003DMG400010725 I 0.706
GSMUA_Achr9G06660_001 Musa acuminata GSMUA_Achr9G06660_001 I 0.706
LPERR01G22080 Leersia perrieri LPERR01G22080 I 0.706
GSMUA_Achr8G27170_001 Musa acuminata GSMUA_Achr8G27170_001 I 0.706
GRMZM2G133972 Zea mays GRMZM2G133972 I 0.706
GRMZM2G031882 Zea mays GRMZM2G031882 I 0.706
MTR_2g015000 Medicago truncatula MTR_2g015000 I 0.706
MTR_7g025010 Medicago truncatula MTR_7g025010 I 0.706
ONIVA01G29060 Oryza nivara ONIVA01G29060 I 0.706
OMERI01G23480 Oryza meridionalis OMERI01G23480 I 0.706
OGLUM01G29670 Oryza glumaepatula OGLUM01G29670 I 0.706
OB01G35000 Oryza brachyantha OB01G35000 I 0.706
GLYMA13G24150 Glycine max GLYMA13G24150 I 0.706
GLYMA13G21860 Glycine max GLYMA13G21860 I 0.706
BGIOSGA001059 Oryza indica BGIOSGA001059 I 0.706
WOX8 Arabidopsis thaliana AT5G45980 I 0.706
WOX9 Arabidopsis thaliana AT2G33880 I 0.706
AMTR_s00021p00189010 Amborella trichopoda AMTR_s00021p00189010 I 0.706
Bo3g027500 Brassica oleracea Bo3g027500 I 0.706
Bo4g041330 Brassica oleracea Bo4g041330 I 0.706
GLYMA10G08030 Glycine max GLYMA10G08030 I 0.706
GLYMA07G32430 Glycine max GLYMA07G32430 I 0.706
Bra022960 Brassica rapa Bra022960 I 0.706
Bra005464 Brassica rapa Bra005464 I 0.706
ORGLA01G0211300 Oryza glaberrima ORGLA01G0211300 I 0.706
OBART01G25820 Oryza barthii OBART01G25820 I 0.706
WOX9 Arabidopsis lyrata Al_scaffold_0004_1872 I 0.706
VIT_10s0003g00560 Vitis vinifera VIT_10s0003g00560 I 0.706
TCM_029776 Theobroma cacao TCM_029776 I 0.706
Solyc02g077390.1 Solanum lycopersicum Solyc02g077390.1 I 0.706
POPTR_0004s05090 Populus trichocarpa POPTR_0004s05090 I 0.706
PRUPE_ppa019841mg Prunus persica PRUPE_ppa019841mg I 0.706
POPTR_0011s05980 Populus trichocarpa POPTR_0011s05980 I 0.706
Ca_00357 Cicer arietinum Ca_00357 I 0.706
Pm010370 Prunus mume Pm010370 I 0.706
Cla009819 Citrullus lanatus Cla009819 I 0.706
OS01G0667450 Oryza sativa OS01G0667450 I 0.706
Ca_06365 Cicer arietinum Ca_06365 I 0.706
Eucgr.D00577 Eucalyptus grandis Eucgr.D00577 I 0.705
PDK_20s13009443g001 Phoenix dactylifera PDK_20s13009443g001 I 0.705
TRAES3BF022100010CFD_g Triticum aestivum TRAES3BF022100010CFD_g I 0.701
Si004249m.g Setaria italica Si004249m.g I 0.701
MLOC_7925 Hordeum vulgare MLOC_7925 I 0.701
BGIOSGA020366 Oryza indica BGIOSGA020366 I 0.690
F775_23099 Aegilops tauschii F775_23099 I 0.690
OS05G0564500 Oryza sativa OS05G0564500 I 0.690
OBART05G25900 Oryza barthii OBART05G25900 I 0.690
OGLUM05G27500 Oryza glumaepatula OGLUM05G27500 I 0.690
ORGLA05G0223800 Oryza glaberrima ORGLA05G0223800 I 0.690
OPUNC05G23480 Oryza punctata OPUNC05G23480 I 0.690
ONIVA05G27800 Oryza nivara ONIVA05G27800 I 0.690
ORUFI05G27780 Oryza rufipogon ORUFI05G27780 I 0.690
Thhalv10001099m.g Eutrema salsugineum Thhalv10001099m.g I 0.690
MTR_4g088070 Medicago truncatula MTR_4g088070 I 0.686
MTR_4g088080 Medicago truncatula MTR_4g088080 I 0.663
Bo9g070070 Brassica oleracea Bo9g070070 I 0.662
Bra017448 Brassica rapa Bra017448 I 0.662
SELMODRAFT_123325 Selaginella moellendorffii SELMODRAFT_123325 I 0.630
SELMODRAFT_115439 Selaginella moellendorffii SELMODRAFT_115439 I 0.630
Thhalv10009654m.g Eutrema salsugineum Thhalv10009654m.g I 0.621
Bra026791 Brassica rapa Bra026791 I 0.621
Bo8g106350 Brassica oleracea Bo8g106350 I 0.621
mgf023275m Mimulus guttatus mgf023275m I 0.615
AMTR_s00012p00149750 Amborella trichopoda AMTR_s00012p00149750 I 0.614
cassava38630.m1 Manihot esculenta cassava38630.m1 I 0.614
29876.m000245 Ricinus communis 29876.m000245 I 0.614
POPTR_0001s24470 Populus trichocarpa POPTR_0001s24470 I 0.614
Cla008386 Citrullus lanatus Cla008386 I 0.614
mgf022370m Mimulus guttatus mgf022370m I 0.605
PDK_20s1465351g003 Phoenix dactylifera PDK_20s1465351g003 I 0.601
AMTR_s00405p00009920 Amborella trichopoda AMTR_s00405p00009920 I 0.599