Pvit_18888 (Pogona vitticeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pvit_18888 T226854_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Meis2
M00437_2.00 		Mus musculus
NTGACANNN
NNNTGTCAN		 PBM
Berger et al.(2008)
Mrg1_2246 		0.447 1.000
MEIS2
M03147_2.00 		Homo sapiens
WTGACAGSTGTCAM
KTGACASCTGTCAW		 SELEX
Jolma et al.(2013)
MEIS2_1 		0.447 1.000
MEIS2
M03148_2.00 		Homo sapiens
DTGACAGS
SCTGTCAH		 SELEX
Jolma et al.(2013)
MEIS2_2 		0.447 1.000
Meis2
M03261_2.00 		Mus musculus
NTGACAN
NTGTCAN		 SELEX
Jolma et al.(2013)
Meis2_1 		0.447 1.000
Meis2
M03262_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Meis2_2 		0.447 1.000
MEIS2
M02740_2.00 		Homo sapiens
TGACASSTGTC
GACASSTGTCA		 SELEX
Jolma et al.(2010)
MEIS2_dimer 		0.447 1.000
MEIS2
M02741_2.00 		Homo sapiens
GGACAKNT
ANMTGTCC		 SELEX
Jolma et al.(2010)
MEIS2_monomer 		0.447 1.000
MEIS2
M05138_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX 		0.447 1.000
MEIS2
M05140_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX 		0.447 1.000
MEIS2
M09143_2.00 		Homo sapiens
HTGACAGBTKTBM
KVAMAVCTGTCAD		 Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B 		0.447 1.000
Meis2
M09189_2.00 		Mus musculus
HTGACAGBTKTBM
KVAMAVCTGTCAD		 Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B 		0.447 1.000
MEIS2
M05139_2.00 		Homo sapiens
YGACASSYGHCR
YGDCRSSTGTCR		 SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX 		0.447 1.000
MEIS2
M05141_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX 		0.447 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18888 Homeodomain 274 323

Links

Other Homeodomain family TFs
Other Pogona vitticeps TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DILT_0001314701 Diphyllobothrium latum DILT_0001314701 N 0.867
ENSPANG00000019600 Papio anubis ENSPANG00000019600 I 0.867
D915_09501 Fasciola hepatica D915_09501 I 0.867
LDEC001304 Leptinotarsa decemlineata LDEC001304 I 0.867
Tal_R002601 Tyto alba Tal_R002601 I 0.867
PHUM547170 Pediculus humanus PHUM547170 I 0.867
Brh_R013532 Buceros rhinoceros Brh_R013532 I 0.867
SCUD_0001235001 Schistosoma curassoni SCUD_0001235001 N 0.867
TRE_0000372801 Trichobilharzia regenti TRE_0000372801 N 0.867
ENSCSAG00000007217 Chlorocebus sabaeus ENSCSAG00000007217 I 0.867
SPER_0001318201 Spirometra erinaceieuropaei SPER_0001318201 N 0.867
CapteG139538 Capitella teleta CapteG139538 N 0.855
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.835
TTRE_0000256401 Trichuris trichiura TTRE_0000256401 N 0.835
D918_09737 Trichuris suis D918_09737 N 0.835
ENSMGAG00000015905 Meleagris gallopavo ENSMGAG00000015905 I 0.835
nRc.2.0.1.g19666 Romanomermis culicivorax nRc.2.0.1.g19666 N 0.833
ENSPSIG00000016694 Pelodiscus sinensis ENSPSIG00000016694 N 0.820
MEIS2 Taeniopygia guttata ENSTGUG00000011748 I 0.819
MEIS2 Sorex araneus ENSSARG00000006585 I 0.819
MCOS_0000352701 Mesocestoides corti MCOS_0000352701 N 0.806
CLEC025153 Cimex lectularius CLEC025153 I 0.802
ENSPMAG00000005538 Petromyzon marinus ENSPMAG00000005538 N 0.749
Meis3 Mus musculus ENSMUSG00000041420 D 0.737
ENSMEUG00000003851 Macropus eugenii ENSMEUG00000003851 I 0.703
Pknox2 Dipodomys ordii ENSDORG00000008635 I 0.703
PKNOX2 Choloepus hoffmanni ENSCHOG00000008048 I 0.703
PKNOX1 Procavia capensis ENSPCAG00000016718 I 0.703
Aan_R012134 Calypte anna Aan_R012134 I 0.703
RO3G_00994 Rhizopus oryzae RO3G_00994 N 0.622
Tgif2 Mus musculus ENSMUSG00000062175 D 0.608
D917_09995 Trichinella nativa D917_09995 I 0.483