Tal_R005491 (Tyto alba)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Tal_R005491 T226879_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.855 0.929
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.830 0.875
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.793 0.821
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.793 0.821
Hlx
M00485_2.00
Mus musculus
NNNAWND

HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.713 0.661
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA

THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.712 0.661
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA

THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.712 0.661
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN

NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.712 0.661
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN

NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.600 0.536
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN

NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.600 0.536
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN

NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.600 0.536
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.600 0.536
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.600 0.536
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY

RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.600 0.536
NKX3-1
M10729_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.600 0.536
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH

DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.600 0.536
NKX3-1
M10731_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.600 0.536
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN

NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.600 0.536
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB

VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.600 0.536
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R005491 Homeodomain 54 109

Links

Other Homeodomain family TFs
Other Tyto alba TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_034400 Acremonium chrysogenum ACRE_034400 N 0.000
BBA_10208 Beauveria bassiana BBA_10208 N 0.000
CFIO01_04039 Colletotrichum fioriniae CFIO01_04039 N 0.000
CMQ_1415 Grosmannia clavigera CMQ_1415 N 0.000
Cob_07971 Colletotrichum orbiculare Cob_07971 N 0.000
CPUR_08694 Claviceps purpurea CPUR_08694 I 0.000
fgenesh1_pg.C_scaffold_10000074 Cryphonectria parasitica fgenesh1_pg.C_scaffold_10000074 I 0.000
MAC_01687 Metarhizium acridum MAC_01687 I 0.000
MAJ_02341 Metarhizium majus MAJ_02341 N 0.000
MAM_00136 Metarhizium album MAM_00136 N 0.000
MANI_015331 Metarhizium anisopliae MANI_015331 N 0.000
MAPG_04417 Magnaporthe poae MAPG_04417 N 0.000
MBM_07425 Marssonina brunnea MBM_07425 N 0.000
MBR_02856 Metarhizium brunneum MBR_02856 N 0.000
MGU_00155 Metarhizium guizhouense MGU_00155 N 0.000
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.000
OCS_03846 Ophiocordyceps sinensis OCS_03846 N 0.000
S40285_07156 Stachybotrys chlorohalonata S40285_07156 N 0.000
S40288_05696 Stachybotrys chartarum S40288_05696 N 0.000
SERLA73DRAFT_131740 Serpula lacrymans SERLA73DRAFT_131740 I 0.000
THITE_22048 Thielavia terrestris THITE_22048 I 0.000
TRIATDRAFT_37227 Trichoderma atroviride TRIATDRAFT_37227 N 0.000
TRIVIDRAFT_16124 Trichoderma virens TRIVIDRAFT_16124 N 0.000
UV8b_7580 Ustilaginoidea virens UV8b_7580 N 0.000
VHEMI02919 Torrubiella hemipterigena VHEMI02919 N 0.000