Tal_R005491 (Tyto alba)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Tal_R005491 T226879_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.855 0.929
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.830 0.875
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.793 0.821
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.793 0.821
Hlx
M00485_2.00
Mus musculus
NNNAWND

HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.713 0.661
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA

THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.712 0.661
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA

THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.712 0.661
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN

NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.712 0.661
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN

NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.600 0.536
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN

NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.600 0.536
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN

NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.600 0.536
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.600 0.536
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.600 0.536
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY

RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.600 0.536
NKX3-1
M10729_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.600 0.536
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH

DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.600 0.536
NKX3-1
M10731_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.600 0.536
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN

NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.600 0.536
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB

VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.600 0.536
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R005491 Homeodomain 54 109

Links

Other Homeodomain family TFs
Other Tyto alba TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I 0.000
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I 0.000
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I 0.000
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I 0.000
GFI1 Anolis carolinensis ENSACAG00000004498 I 0.000
Afo_R001655 Aptenodytes forsteri Afo_R001655 I 0.000
Afo_R006147 Aptenodytes forsteri Afo_R006147 I 0.000
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I 0.000
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I 0.000
GFI1 Bos taurus ENSBTAG00000016723 I 0.000
GFI1B Bos taurus ENSBTAG00000012772 I 0.000
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I 0.000
Brh_R002465 Buceros rhinoceros Brh_R002465 I 0.000
GFI1 Callithrix jacchus ENSCJAG00000017609 I 0.000
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.000
Aan_R008865 Calypte anna Aan_R008865 I 0.000
Aan_R000889 Calypte anna Aan_R000889 I 0.000
GFI1 Canis familiaris ENSCAFG00000020155 I 0.000
GFI1B Canis familiaris ENSCAFG00000019877 I 0.000
CapteG45287 Capitella teleta CapteG45287 I 0.000
GFI1 Cavia porcellus ENSCPOG00000011727 I 0.000
GFI1B Cavia porcellus ENSCPOG00000026928 I 0.000
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I 0.000
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I 0.000
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I 0.000
CGI_10017941 Crassostrea gigas CGI_10017941 I 0.000
CGI_10011355 Crassostrea gigas CGI_10011355 I 0.000
gfi1aa Danio rerio ENSDARG00000020746 I 0.000
gfi1ab Danio rerio ENSDARG00000044457 I 0.000
gfi1b Danio rerio ENSDARG00000079947 I 0.000
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I 0.000
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I 0.000
Gfi1b Dipodomys ordii ENSDORG00000000342 I 0.000
GF15430 Drosophila ananassae FBgn0092455 I 0.000
GG10437 Drosophila erecta FBgn0102746 I 0.000
GH13715 Drosophila grimshawi FBgn0121191 I 0.000
sens-2 Drosophila melanogaster FBgn0051632 D 0.000
GI23984 Drosophila mojavensis FBgn0146708 I 0.000
GL26188 Drosophila persimilis FBgn0163770 I 0.000
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.000
GM16223 Drosophila sechellia FBgn0171139 I 0.000
GJ21268 Drosophila virilis FBgn0208401 I 0.000
GK24242 Drosophila willistoni FBgn0226203 I 0.000
GE14143 Drosophila yakuba FBgn0231766 I 0.000
GFI1 Equus caballus ENSECAG00000006647 I 0.000
GFI1B Equus caballus ENSECAG00000008127 I 0.000
GFI1 Erinaceus europaeus ENSEEUG00000000198 I 0.000
GFI1B Felis catus ENSFCAG00000027147 I 0.000
GFI1 Felis catus ENSFCAG00000005914 I 0.000
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I 0.000
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I 0.000
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I 0.000
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I 0.000
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I 0.000
GFI1B Gallus gallus ENSGALG00000003478 I 0.000
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I 0.000
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I 0.000
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I 0.000
Gfo_R007994 Geospiza fortis Gfo_R007994 I 0.000
Gfo_R010648 Geospiza fortis Gfo_R010648 I 0.000
GFI1 Gorilla gorilla ENSGGOG00000005320 I 0.000
GFI1B Gorilla gorilla ENSGGOG00000015828 I 0.000
GFI1 Homo sapiens ENSG00000162676 D 0.000
GFI1B Homo sapiens ENSG00000165702 D 0.000
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I 0.000
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I 0.000
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I 0.000
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I 0.000
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I 0.000
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I 0.000
LotgiG83709 Lottia gigantea LotgiG83709 I 0.000
LotgiG129344 Lottia gigantea LotgiG129344 I 0.000
GFI1B Loxodonta africana ENSLAFG00000022367 I 0.000
GFI1 Loxodonta africana ENSLAFG00000018346 I 0.000
ENSP00000361195 Macaca fascicularis ENSP00000361195 I 0.000
ENSP00000399719 Macaca fascicularis ENSP00000399719 I 0.000
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.000
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I 0.000
GFI1 Meleagris gallopavo ENSMGAG00000008187 I 0.000
GFI1B Meleagris gallopavo ENSMGAG00000006129 I 0.000
GFI1B Monodelphis domestica ENSMODG00000012600 I 0.000
GFI1 Monodelphis domestica ENSMODG00000011802 I 0.000
MDOA011065 Musca domestica MDOA011065 I 0.000
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I 0.000
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I 0.000
Gfi1 Mus musculus ENSMUSG00000029275 D 0.000
Gfi1b Mus musculus ENSMUSG00000026815 D 0.000
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I 0.000
GFI1 Myotis lucifugus ENSMLUG00000015191 I 0.000
GFI1B Myotis lucifugus ENSMLUG00000006673 I 0.000
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I 0.000
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I 0.000
GFI1 Ochotona princeps ENSOPRG00000001473 I 0.000
Ogr09401 Ophisaurus gracilis Ogr09401 I 0.000
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I 0.000
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I 0.000
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I 0.000
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.000
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I 0.000
gfi1b Oryzias latipes ENSORLG00000014390 I 0.000
gfi1aa Oryzias latipes ENSORLG00000005060 I 0.000
GFI1 Otolemur garnettii ENSOGAG00000027913 I 0.000
GFI1B Otolemur garnettii ENSOGAG00000008879 I 0.000
GFI1B Pan troglodytes ENSPTRG00000021505 I 0.000
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I 0.000
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I 0.000
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I 0.000
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I 0.000
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I 0.000
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I 0.000
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I 0.000
Pvit_00259 Pogona vitticeps Pvit_00259 I 0.000
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I 0.000
GFI1B Procavia capensis ENSPCAG00000012329 I 0.000
GFI1 Pteropus vampyrus ENSPVAG00000006928 I 0.000
Gfi1b Rattus norvegicus ENSRNOG00000011353 I 0.000
Gfi1 Rattus norvegicus ENSRNOG00000002042 D 0.000
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I 0.000
Sakowv30015302m.g Saccoglossus kowalevskii Sakowv30015302m.g I 0.000
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I 0.000
GFI1 Sus scrofa ENSSSCG00000006902 I 0.000
GFI1B Sus scrofa ENSSSCG00000005737 I 0.000
GFI1 Taeniopygia guttata ENSTGUG00000006060 I 0.000
gfi1aa Takifugu rubripes ENSTRUG00000004744 I 0.000
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.000
gfi1ab Takifugu rubripes ENSTRUG00000000415 I 0.000
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.000
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I 0.000
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I 0.000
GFI1 Tursiops truncatus ENSTTRG00000000082 I 0.000
Tal_R006464 Tyto alba Tal_R006464 I 0.000
Tal_R001363 Tyto alba Tal_R001363 I 0.000
gfi1b.L Xenopus laevis XB-GENE-944429 I 0.000
gfi1b Xenopus tropicalis XB-GENE-944426 I 0.000
gfi1 Xenopus tropicalis XB-GENE-960553 I 0.000
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I 0.000