Q39944_HELAN (Helianthus annuus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Q39944_HELAN T226940_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q39944_HELAN
M10802_2.00
Helianthus annuus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HAHB4_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-12
M00865_2.00
Arabidopsis thaliana
NNNNNNNN

NNNNNNNN
PBM
Franco-Zorrilla et al.(2014)
ATHB12
0.630 0.579
ATHB-12
M02045_2.00
Arabidopsis thaliana
BHWWWWWWDV

BHWWWWWWDV
PBM
Weirauch et al.(2014)
pTH7207
0.630 0.579
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.606 0.526
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.606 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q39944_HELAN Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Helianthus annuus TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ATHB-12 Arabidopsis thaliana AT3G61890 D 0.630
PK20392.1 Cannabis sativa PK20392.1 D 0.606
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I 0.601
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I 0.630
Bostr.13158s0194 Boechera stricta Bostr.13158s0194 I 0.630
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I 0.606
Cagra.0483s0055 Capsella grandiflora Cagra.0483s0055 I 0.630
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I 0.606
Carubv10001498m.g Capsella rubella Carubv10001498m.g I 0.606
Carubv10017952m.g Capsella rubella Carubv10017952m.g I 0.630
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I 0.606
Cucsa.259560 Cucumis sativus Cucsa.259560 I 0.608
Cucsa.158420 Cucumis sativus Cucsa.158420 I 0.606
cassava39955.m1 Manihot esculenta cassava39955.m1 I 0.606
Ca_10527 Cicer arietinum Ca_10527 I 0.606
Ca_17608 Cicer arietinum Ca_17608 I 0.697
Cla010510 Citrullus lanatus Cla010510 I 0.606
Cla021437 Citrullus lanatus Cla021437 I 0.608
Pm015861 Prunus mume Pm015861 I 0.606
Pm018314 Prunus mume Pm018314 I 0.666
29822.m003500 Ricinus communis 29822.m003500 I 0.606
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I 0.606
Ciclev10012525m.g Citrus clementina Ciclev10012525m.g I 0.609
Ciclev10016895m.g Citrus clementina Ciclev10016895m.g I 0.625
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I 0.632
orange1.1g040769m.g Citrus sinensis orange1.1g040769m.g I 0.609
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I 0.606
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I 0.654
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I 0.654
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I 0.606
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I 0.606
Thhalv10006221m.g Eutrema salsugineum Thhalv10006221m.g I 0.657
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I 0.606
MDP0000737128 Malus domestica MDP0000737128 I 0.606
MDP0000316497 Malus domestica MDP0000316497 I 0.697
MDP0000311522 Malus domestica MDP0000311522 I 0.633
Eucgr.D02645 Eucalyptus grandis Eucgr.D02645 I 0.612
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I 0.606
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I 0.606
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I 0.666
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I 0.606
Gorai.001G256300 Gossypium raimondii Gorai.001G256300 I 0.606
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I 0.606
MDP0000124827 Malus domestica MDP0000124827 I 0.606
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I 0.606
TCM_018470 Theobroma cacao TCM_018470 I 0.606
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I 0.602
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I 0.654
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I 0.606
ATHB-12 Arabidopsis lyrata fgenesh2_kg.5__2686__AT3G61890.1 I 0.630
GLYMA06G35050 Glycine max GLYMA06G35050 I 0.600
GLYMA09G37410 Glycine max GLYMA09G37410 I 0.605
GLYMA18G49290 Glycine max GLYMA18G49290 I 0.605
GLYMA19G02490 Glycine max GLYMA19G02490 I 0.606
GRMZM2G034113 Zea mays GRMZM2G034113 I 0.613
GRMZM2G041462 Zea mays GRMZM2G041462 I 0.654
Bra023506 Brassica rapa Bra023506 I 0.606
Bra014417 Brassica rapa Bra014417 I 0.643
HAT7 Arabidopsis thaliana AT5G15150 I 0.606
Bo2g012410 Brassica oleracea Bo2g012410 I 0.606
Bo3g010120 Brassica oleracea Bo3g010120 I 0.606
Bo4g100070 Brassica oleracea Bo4g100070 I 0.657
Bo8g097390 Brassica oleracea Bo8g097390 I 0.630
Bo9g165360 Brassica oleracea Bo9g165360 I 0.606
Bra006285 Brassica rapa Bra006285 I 0.606
Bra007637 Brassica rapa Bra007637 I 0.630
Bra008717 Brassica rapa Bra008717 I 0.606
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I 0.606
GSMUA_Achr1G18670_001 Musa acuminata GSMUA_Achr1G18670_001 I 0.602
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I 0.606
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I 0.666
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I 0.606
Sb02g030660 Sorghum bicolor Sb02g030660 I 0.654
Si030983m.g Setaria italica Si030983m.g I 0.654
Solyc03g034110.2 Solanum lycopersicum Solyc03g034110.2 I 0.627
Solyc03g034120.2 Solanum lycopersicum Solyc03g034120.2 I 0.637
Solyc03g034130.2 Solanum lycopersicum Solyc03g034130.2 I 0.621
Solyc03g082550.2 Solanum lycopersicum Solyc03g082550.2 I 0.609
PGSC0003DMG400018509 Solanum tuberosum PGSC0003DMG400018509 I 0.609
PGSC0003DMG400017787 Solanum tuberosum PGSC0003DMG400017787 I 0.627
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I 0.606
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I 0.612
GSMUA_Achr6G36450_001 Musa acuminata GSMUA_Achr6G36450_001 I 0.605
ML149617a Mnemiopsis leidyi ML149617a I 0.646
MTR_1g061660 Medicago truncatula MTR_1g061660 I 0.604
MTR_6g011610 Medicago truncatula MTR_6g011610 I 0.606
MTR_8g026960 Medicago truncatula MTR_8g026960 I 0.697
PGSC0003DMG400017775 Solanum tuberosum PGSC0003DMG400017775 I 0.628
PGSC0003DMG400017776 Solanum tuberosum PGSC0003DMG400017776 I 0.627
Solyc08g083130.2 Solanum lycopersicum Solyc08g083130.2 I 0.643