CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q68SS9_PLEDJ
(
Pleurotus djamor
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Q68SS9_PLEDJ
T226941_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q68SS9_PLEDJ
M02207_2.00
Pleurotus djamor
DBCAATCV
BGATTGVH
PBM
Weirauch et al.(2014)
pTH5698
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02207_2.00
Homeodomain
1
57
PAAKTSFNADFVPFLEKYFEFNAYPSAADRSLMARKSMMTPRQIEVWFQNHRNRARK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q68SS9_PLEDJ
Homeodomain
144
200
PAAKTSFNADFVPFLEKYFEFNAYPSAADRSLMARKSMMTPRQIEVWFQNHRNRARK
Links
Other
Homeodomain
family TFs
Other
Pleurotus djamor
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PLEOSDRAFT_155731
Pleurotus ostreatus
PLEOSDRAFT_155731
I
0.599